Magallana gigas (Pacific oyster): 105342042 Help Entry 105342042         CDS       T03920                                  Name (RefSeq) protein lingerer isoform X1   KO K26545   ubiquitin-associated protein 2 Organism crg  Magallana gigas (Pacific oyster) Brite KEGG Orthology (KO) [BR:crg00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:crg04121]     105342042    03400 DNA repair and recombination proteins [BR:crg03400]     105342042 Ubiquitin system [BR:crg04121]  Ubiquitin ligases (E3)   Multi subunit type E3    Multi subunit type E3 associated proteins     105342042 DNA repair and recombination proteins [BR:crg03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     Other NER factors      105342042 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  UBAP2-Lig GIP1_N UBA_4 Motif Other DBs NCBI-GeneID:  105342042 NCBI-ProteinID:  XP_034324513 LinkDB All DBs Position 6:complement(40882502..40901322) Genome browser AA seq 1371 aa AA seqDB search MTTILSTSRASNRQIKDKNVKPAKDTTQSRSEGPPEKAKATPEQLRLAQLTSVNSKEDAE FEKKVVQVMEITGRDKNVCEIALQDCKNDTDRAVNMLLENDFEEGMGEWRETTKKKKRQT PSNSTNSKSDSNNHIEEESPKPEQTIDTEKPDRRERPESSNRRNKRPDTRPPRLANKGRG GRDKPEYFRSEKMNGDTENDSNFGTFGNNKERDGDGSRGRGRGRGRGRGRGAGGGSSGRG RSYNRPQRFDGGPQIDTWTNETAENAEKGNMAGSWGDMEDWSEDQWTGSLTESKVFTSST KNTQKAENSNSLNDSSNGIGQRLDLGTLLQKPSSDTESAFISQFNQQATESIKNSIGIGS GNRAQYSSQETSRSTFSSSPLTSTALTNHLQSSALSSQLPCSLSSDITSTAAVDALVSTF TQQGQNIAANANLDQISGSNLLPVVSQNSSSDGSSAGNLQSVLQQRPKPQRSKLPPPSKI PASAVEMPGHQKQMGSLDVQFGNWESSAETSLFSFGSDSSVSKSMPSTLASSTNTSMNNH ISQQNESVMTSRITTPPNSSSTMAGQESPRSSMFHNSPYTTPTKKDSSALAQNKRSPHET MPFPQSQTDRKSSSMIGSQRSGSSQSSMQTSKADSSLSFSQSAPGGYQGSYQSQSVLSNS TGLSNSSGLRGDVSSLSRDPSVLSSMDATGLSVSSLSNSSGLTNSTGMSTASGLVNSSGL SNSRDPSSLTGAPGLSNSSGLSNTGNLQSSGLSNSTGLSNSSGMGSTAFNTTQQNYQSQY QSGSSQYQASQNQYQSGQGYNSSSSQYQNQYHQNYGQSGSSFPNQNSYGSGSSYNSQSSQ NSLYQSSVPTTYSNQNSASQNAQNSLYHQSSPSSYQQNSQSYHRDSQAPGAYSANVSQSN SSSYQRDSSQSGLSTTVSQSQTGYSSQTYGSSQHQNSLPSNLQSSPLNPNKLGDSLSKMS VKDSSMDTRQSPQYDSSSTTTSTLTGTTSTSSLSTGTNTPSTTTSTSLPSAAGNSVSKTN SNTSNSSSSAQTSKAPPNLPPGVLLGNPQYIVGQGTLPYFPNLQALQQPLYGYEDLQLLQ QRLPLPGYNYDLSGFGVPTTLGGRDQQSLGNVPYSGTDNKLTRVDAQSPIPTTQNSSQST HQQQQQQQQQHFINLPYGYYYPSVLPNAAPGFQFPGTPMFPVPPATNTAHAGTSASAQYQ KYGSHYGSKQGYEDLTQATDFSKSSYLNQSQNKVSSVSGGTVTAADLPGTGYGKSHTQML NLGDRVTKSFPPRHQRTHDAFDKQGFAAGTPPPFSLPLAAGTQAGPMGAPTNPYGTPGPF IPVMPHSQIHHPTLHQDSSPGTSRGSQAQNTSQSKANAAKTYNVGSYWGSS NT seq 4116 nt NT seq  +upstreamnt  +downstreamnt atgactaccatactgagcacgagtcgtgccagcaaccggcaaattaaagacaaaaatgtc aaacctgccaaagacacaacacagtccagatcagagggaccacctgaaaaggccaaggcc actccagaacaacttcgcctagcacagcttacatctgttaactcgaaagaggatgctgaa tttgaaaagaaagtcgtccaggttatggaaataactggacgtgacaaaaatgtatgcgaa attgctttacaagactgcaaaaatgacacagatagagctgttaatatgcttctagaaaat gactttgaagagggaatgggtgaatggagggagaccacaaagaagaagaaaagacaaaca ccctccaattccactaattccaaatcagattccaataatcacatagaggaggaatctccc aaaccagaacagaccatagacacagaaaagcctgataggcgagaacgaccagagagcagc aaccgacgaaacaaaagaccggatacacgccctccacgtctggccaataagggaagggga ggcagagataagccagaatactttcgcagtgaaaagatgaatggcgatacagaaaatgac agtaactttggaacatttggcaacaacaaagagcgtgatggagatggaagtcgggggcga ggcagggggcgtggccgagggagaggtcgtggtgctggaggaggaagcagtggacgagga agaagttataacagaccacagcggtttgacggtggtcctcaaattgacacatggaccaat gaaacagctgaaaatgcagaaaaaggaaacatggctggaagctggggagacatggaagac tggagtgaagatcagtggactggaagtctcacagaatccaaagtgttcacatcttcaacc aaaaacacccagaaagctgaaaattccaacagcctgaatgattcctcgaatggaattggt cagaggttagatcttgggactttactacaaaagcccagcagtgacacagaatcagccttc atctctcagtttaaccagcaagctacagagtccattaaaaactctattggcattggttct gggaaccgagcacagtattctagtcaggagaccagtcgatctaccttcagtagcagccca ctgacaagcactgctttgaccaatcacctgcagtcgtcagctttgtcctctcagctcccc tgctccctgtccagtgacatcacatccacagctgcagtagatgccttggtgtcgacattt acccagcagggtcagaacattgcagcgaatgccaatctggaccaaatcagtggcagtaac ttattgcctgttgtgtcgcaaaactccagttcagacggctcttcagcaggaaatctacag tctgttctgcaacagaggccaaagccacagaggtcaaagttacctcctccctcaaagatt cctgcttctgctgtggaaatgccaggacaccagaaacagatgggaagccttgatgtacag tttgggaactgggagtcttcagctgaaacctcactgtttagttttgggtctgactcttct gtatcaaagagtatgccgagtacacttgctagcagtacaaacacttcaatgaacaatcat atttctcaacaaaatgaatctgtgatgacctcaaggattactactcctcccaacagtagc tccaccatggccggtcaagaatctccgcgaagcagcatgttccataactcaccatacaca actcctaccaagaaagactcctcagctcttgctcaaaacaagaggagtcctcatgagaca atgccattcccgcaatctcagactgacagaaaatccagctccatgattggatcacagaga tcaggatcaagtcagagttccatgcagacaagcaaagctgattcaagtctgagcttttcc cagagtgctcctgggggttaccaagggtcatatcagtctcaatctgtactcagcaattcc actggactcagcaactcgtcaggactccgaggagatgtgtccagtctcagtcgagatcct tcggtcctgtcgtccatggatgccacaggattgtcagtgtcaagtctttcaaactcaagt ggattgacaaactccacaggaatgtccacagcatcgggattagtgaattcctcagggttg tcaaattctagagatccatcttctttaacaggtgctccaggcctgagtaattcatctgga ttatcaaatacaggaaatctccaaagttcaggactttccaattccactggtctgtcaaac agtagtggaatgggcagcactgcctttaatacaactcagcagaactatcagagccagtat caatctggatctagccaataccaagctagtcagaatcagtatcagtctggtcagggctat aactcaagttcttctcagtatcaaaatcagtaccatcagaactatggacagtctgggtct tcgttccccaatcaaaattcatacggcagtggaagtagctacaactcgcaatcctcgcag aattctttgtatcagtcgtctgtgccgactacatactcgaaccagaattccgcctctcaa aacgcccagaattccctgtaccatcagtcatcgccatcatcttaccaacagaacagtcag tcttatcacagagactcgcaagcccccggtgcatattcggcaaatgtgagtcagtccaac tcgagttcataccaaagagacagtagtcagtctgggctgtccaccacggtgtctcagagt cagactggatactcctctcaaacctatgggtcttcacagcatcaaaacagcttgccatcc aacctacaaagttcaccattaaatcccaacaaactaggagattctctgtccaagatgtcg gtaaaagactcatcgatggacaccaggcagtcacctcagtatgattcctcctcaacaaca acaagtactctgactggaacaacaagcacatcctcactgtccacaggaaccaataccccc tctacaacaacttctacgtccttgccatcagctgctggtaacagtgtatccaaaactaac tccaacaccagtaatagtagttcttcagctcaaaccagtaaagcccccccaaatttaccc cctggggttcttctaggaaatcctcagtacatcgttggacagggaactttgccttatttt cccaatttacaggctcttcaacaacctctgtatggatatgaagatcttcaattacttcaa caaagactgccactgcctggatacaactacgacttgtctggatttggagttccaacaacg ttaggaggtcgagatcagcaatcccttggaaatgtgccatattcaggaactgacaacaag ctgactcgagtggacgcccagtcaccgattcctacgacgcagaactcgtctcagtccacg caccagcaacaacaacagcagcagcagcagcacttcatcaacctgccctacggatactac tacccctcagtgctgcccaacgctgccccagggttccagttccctggcacacccatgttc cctgttcctccagcgaccaacactgcacatgctggtacatcagcctcggcccagtatcag aagtatggatcacactatggaagcaaacaagggtatgaagacctgactcaggccacagat ttctctaaatccagctatttgaatcagtcccagaataaagtgtcctctgtatcaggcggc acagtgacagctgcagatctgccaggaacaggatacggcaaatctcacacccagatgctt aatttgggtgatcgagttacaaaatcctttcctcccagacaccaacgaacgcatgatgca tttgacaagcaaggctttgctgcaggtacccctcctcctttcagtttgcctctagcagct ggaacccaagctggtcccatgggagccccaacaaacccatatggcaccccaggtccattt attcctgtgatgcctcactcccagattcaccatcccacacttcatcaggactccagtcca ggaaccagccgagggagccaagctcagaacacatcccagtctaaagcaaacgctgccaag acctacaacgtagggagctactggggcagcagctag

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