Magallana gigas (Pacific oyster): 105342151
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Entry
105342151 CDS
T03920
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 isoform X1
KO
K18440
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 2
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
105342151
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crg04131
]
105342151
Membrane trafficking [BR:
crg04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
105342151
Endosome - Golgi transport
Arf GTPase associated proteins
105342151
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
105342151
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH
ArfGap
PH_11
SAM_1
SAM_2
PH_8
RA
RA_2
SOS1_NGEF_PH
RA_3
PH_9
PH_2
HAD_2
Motif
Other DBs
NCBI-GeneID:
105342151
NCBI-ProteinID:
XP_011447319
LinkDB
All DBs
Position
2:complement(13399045..13453001)
Genome browser
AA seq
1742 aa
AA seq
DB search
MDLGRTLEEWLSNLDLGQYLSNFQAAGITEISHLFSLDDGFLTDIGVTPVGHRKRVLDHL
PTTSGGSASEEDYVNCPSPQGLGPEVDDIYANVPLDVQERGPSFPTTHEPKPSLSISGNK
KKPVPRPRKSRTTQSSPEDRQHSPSVTPDDSFPPSYDTVLSIGHTSVSIEGYTNSESSTD
DVVQTSHLPGAWKPVSEPSHDVQHNFSDNFADFDVAEEQKVEGAVAQNNLFPLNQKTSNQ
QHTVSSTPLDLTDLAKFENAENRNSDTYEPIWTSKAEQTNKTVQGLSSPLLHTPPVSTPE
APAPCRTHFPFEGNVNDSFGSTSTCPYDSPLRRDIVVDEDDAIYYNTDSHREKEPEIQVP
TRKVTPSSEIKDSDGSKEHNESGESDGLNSSFDMPPPEFAPPPLPNGSTHSVPLGLSEFD
PLNVPVLPPVPPRINPDSAVASHGYINIDSKTEKSASSPSPADRDIYSLANFSNLQVTST
PKDKTSVNHSKSDPSVSPRSPRNRHMFTSQPSNMSLSSDPFRGDDPFDEFHGECAEFNDQ
FPRHDSSANSREMFDDFQYSEATNLSGSSPHHGQPKPLPHCHLMSNSSDLYSMASPIPNY
SSEDSSDERSIDSMDNGSLNNPAMSPVEIVPIGQVTPQRKNEKSGYLFKQGGVKANKGWR
KRWVVFTGNSLRYYDSRKSQVSKRIVPLSCMEKVETLVKDSDKDKFKFNLHTTNRVFQFA
ADSLQECTLWCSTLMECILKYKAPPGGEPEGLDMNEPDKQGYIKFERRNNYFVAVKQGKM
CYYHSEQDFKQGSPINEIDMKLANVKEIGKGKLQLSTHYSHFLLIPESYSECVLWKMAFE
ESIADALGDNTILDQVMGNPSNRVCADCSAEDPHWASINIGIVLCKKCADLHSGMILPAG
IHRNFEHSISRVKSLRMDTKIWTPSLIEMMKAIGNGNANDFWQHELPPDKRINTDTSAAQ
RMALIENKYKAKLYCDRSGISDNQKVLNEKLLEFSVRGDLLQTMKVTFLGANMYYTNSEG
ENAYRIAKRMGQRLTMEFLFQNGGERSSSSFNDSDEGQVSRLRAEVCLDGYLQKTGSNKK
DFRKRWCVIEHGCLRYFLSQTSSGAKDSVDNDIMMCVQAVSTYDKSLSNVRNLNKRYPEA
FELSTCKKDNREYLFAASTPQERKSWMVALAKLFCPVSLMADIGQCEFNLAGNFYIKDVL
SSWEKTWLMINNRILEYFDKNKQEFCKVDLRKALNIKYSESTLACTTCLEVGKCLALDVY
GKSLYIQADLARDTERLLNVCSKAMKTGGDTLEDQNLSPSNVPVIIEKCVCFIEDYGIQE
EGIYRLSGVKSKVQALLDRFMADAHSVVLQQGVNQVHEVAACLKLFFRSLKDPLLMSTKH
QLWIDNADDIMYGRMDPQVKLEWYQFLIRELPPVNYSTLKRLIHHFNRLARYSAQNKMTE
KNIAIAFGPTLMQTESESEVNSLHVQLQMVVIGDIMKHHQKLFKLGEDEKLMQEKVDEGK
KILDGIITTKENVDVNDSLKISVFFLSRSGNCYNPEVNIHTTVKQVIDQLKYRFNATHEE
YSLHEVLCDGALERPLHDTDHPHAVVKAWWDWPDCYRKQACLCLKPTPDLMLKLSNMYDP
SRALFSEIRLIEKKQTGLLISKSNKYAFQFQQSRLSYFKDAKSAGGSPIGSWNIEDLVIY
YGMDPIIRKGDKYGVTFLKVGETPGSKETPVFGHTLCFSSENDSLSWMAGLLAAQHPEGL
LP
NT seq
5229 nt
NT seq
+upstream
nt +downstream
nt
atggacttgggacgaaccttggaggaatggctgagcaacttggatctgggacaatacctg
tccaatttccaggcagcgggaatcaccgaaatctcccacctgttttccttagatgatgga
tttttgacagatatcggagttactcctgtgggtcatcgaaagagagtcctagatcatctc
ccaacaacctcaggaggatcagccagtgaggaggattatgtgaactgtccctcgccccaa
ggcttaggcccagaagtggacgacatttatgctaatgttccactggatgtccaagagaga
ggtccatcatttcccacaacacacgagccaaagccgagtttatctatatcggggaataaa
aagaaacctgttccaagaccaaggaagtcaaggacaacccaaagcagcccagaggataga
cagcacagccctagtgttacacctgatgatagctttcctccaagttacgatactgtgtta
agcatcggtcatacttctgtgtccatagagggttataccaactcagagtcttctacagat
gatgttgtacaaacaagccatcttcctggtgcttggaaacctgtgtcggaaccctctcat
gatgtgcagcataacttcagtgacaattttgctgactttgatgtagcagaagaacaaaaa
gttgaaggtgcggttgctcagaacaatttgttcccattgaatcagaaaactagcaaccag
caacacacagtatcatccactcctttggacttaacagacttggctaagtttgaaaatgca
gaaaacagaaattcagacacatatgagccaatatggacatccaaggcagaacagaccaat
aagactgtgcaaggtttgtcctccccattgttacacacaccccctgtgtctaccccagag
gctccagccccatgtaggacacacttcccattcgaaggcaatgttaacgatagctttggt
agtactagcacctgtccatatgacagtcctcttagaagagatatcgtagtggatgaagat
gatgccatctattacaatactgactctcatagggagaaggagcctgagatacaagtgcct
accagaaaggttacaccttccagtgaaattaaagactcagatggttcaaaggagcacaat
gagtcgggtgagagtgacggattgaactcttcctttgacatgcctccacctgagtttgca
ccaccaccactgcctaatggatccacccacagtgtcccccttggactgtctgagtttgat
cctcttaatgttcctgtcttaccccctgtaccacctcgcattaatcctgactctgctgtc
gcctcgcatggatatattaacattgattcaaagactgaaaaatctgcttcaagtccttca
ccagcagatcgtgacatatactctttggccaacttttccaatttgcaagtgaccagcaca
ccaaaggataaaaccagtgtaaaccactcgaagtctgacccctctgtgtcccctagaagc
ccccgaaacaggcacatgttcacatctcagccttcaaatatgtctctctcttcagaccct
ttcaggggagacgacccctttgatgagtttcacggggaatgtgcggagtttaatgaccag
tttccccgacatgacagtagtgctaactccagagagatgtttgatgacttccagtattct
gaagccactaacttgagtggttctagtcctcaccatggacagccgaaacctctaccccac
tgccacctgatgagcaactcttcagatctgtattccatggcatcaccaataccaaattat
agttcggaggacagttctgatgaaaggtccattgattctatggacaatggttcccttaat
aaccccgccatgtctcccgtggaaatagttcccataggacaagtcactccacaaagaaaa
aatgaaaagtcagggtatctttttaaacaaggaggagttaaagctaataaaggttggaga
aagcgctgggttgtgttcactgggaacagtcttcgttactatgacagtcgcaagtctcag
gtttcaaaaagaatcgttccattgtcatgtatggagaaggttgaaacacttgtcaaggac
agtgacaaggacaagtttaagtttaacctacataccaccaacagggtgttccagttcgct
gctgactcgcttcaggagtgtacactatggtgcagtactctgatggaatgtatcctcaag
tataaggccccaccaggaggtgaacctgaggggttggacatgaatgagccagacaaacag
ggttatatcaaatttgagaggcgtaacaattattttgtggcagttaagcaaggaaaaatg
tgctattaccattctgaacaggatttcaaacaaggatctcccataaatgagattgatatg
aagctggccaatgtcaaggaaataggcaaaggaaagttacagttgtccacacattattcc
catttcttattaattccagagagctatagtgaatgtgttctatggaaaatggcatttgaa
gagtccattgctgatgctttaggggacaacacgatcctggatcaagtgatggggaacccc
agcaacagagtgtgtgcagactgctcagctgaagatccccactgggcttccatcaatatc
gggattgtgttgtgtaaaaaatgtgcagatcttcacagtggaatgattctgccagctggt
atccatcggaactttgaacactccatatcaagagtcaagtcccttcggatggataccaaa
atatggacgcctagtctaatagagatgatgaaagccattggaaatggaaacgctaatgac
ttttggcagcacgagttacctcccgacaaacgaatcaacacagacacatcagctgcccaa
agaatggccctgatagaaaacaaatacaaagccaagctttactgtgatagatctggcata
tcagacaaccaaaaagttctcaatgagaaattattagaattcagtgtacgtggagacctt
ctacagacaatgaaagttacctttttaggtgccaatatgtattatacaaatagtgaaggt
gaaaatgcatatagaatagcaaagcgtatgggccaaagattgaccatggaatttcttttc
caaaatggaggagaacggtcttccagctcttttaatgattcagatgagggtcaggtcagc
agactaagggccgaggtctgtctagatggttatttacaaaagacagggagcaataaaaaa
gatttccgcaagagatggtgcgtgatagagcatggatgtctgcggtattttttgagtcaa
actagttcaggagccaaagacagtgtggacaatgatatcatgatgtgtgtccaggcagtt
tccacctatgacaagtccttgtctaatgtgagaaacttgaataaaagatacccagaggca
tttgaacttagcacctgtaaaaaggacaatcgggagtatctgtttgccgcctctacccct
caggaacggaagagctggatggtggccctggctaaattattctgtccagtttcactaatg
gcggatattggtcaatgtgaattcaaccttgcaggaaatttctacataaaggatgtttta
tcttcgtgggaaaaaacttggttgatgatcaacaacagaatactggaatactttgataaa
aacaaacaagaattttgtaaagtagatctcaggaaagccttgaatatcaaatacagtgaa
tccacccttgcctgcacaacatgtctggaagtgggcaaatgtttggctctggatgtctat
ggaaagtctctctatatccaagctgatctcgcccgggacacagaaaggttactaaatgtg
tgcagtaaagctatgaaaactggaggtgatactttggaggaccaaaatctctccccctca
aatgttccagtcattattgaaaagtgtgtctgcttcatagaggattatggtatacaagaa
gaaggaatataccgactgtccggtgtcaaatcaaaggttcaggctctgctggacaggttt
atggctgatgcccactcggttgtgctacagcagggggtgaaccaggtccacgaggtggcg
gcctgtctgaagctgttcttccgcagtctcaaggacccgctcctgatgagcaccaagcat
cagttgtggatagacaatgctgacgatattatgtatggtcgcatggacccccaggtgaag
ttggagtggtaccagttcctgatccgagagcttcctcccgtcaattacagcacactcaaa
agactcattcaccacttcaacagacttgcaagatactcggctcagaataagatgacagag
aagaacattgctattgcctttggtccaacactaatgcaaacagaatcagagtcagaagtt
aacagtcttcatgtgcagctacagatggttgtcataggagatatcatgaagcaccaccag
aaactgttcaagcttggggaggatgagaagttgatgcaggagaaggttgatgaagggaag
aagattctggacgggatcatcaccaccaaggagaatgtggacgtaaatgattccctaaag
attagtgttttcttcctgagtcgcagtggaaactgttacaatccagaggtcaacattcac
accactgtaaaacaggtgattgaccagttgaagtacagatttaatgcgacccatgaagaa
tattccttacatgaggtcttgtgtgatggagctctagagcgacctctccatgacacggac
catccccacgcggtggtgaaggcgtggtgggactggcccgactgttataggaaacaggcc
tgtctctgtctaaagcccacccctgatctcatgctcaaattgtccaacatgtatgaccca
agccgggccttattctcagagatccgcttgatagagaagaaacagacggggttattaatc
agtaaatccaacaaatatgccttccagttccagcaatccagactatcctacttcaaggat
gccaaatctgcaggaggttcccctatcgggtcctggaatattgaggatttagtcatttat
tatggaatggatccaataatcagaaagggagacaagtatggagtcacattcctgaaagtt
ggtgagacaccaggatcaaaggagaccccagtatttggacatactctgtgtttctcatca
gaaaatgactcactgagttggatggctgggttgcttgctgcacagcatccagagggtctg
ttaccatga
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integrated database retrieval system
