Magallana gigas (Pacific oyster): 105342257
Help
Entry
105342257 CDS
T03920
Name
(RefSeq) TBC1 domain family member 23 isoform X1
KO
K22555
TBC1 domain family member 23
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crg04131
]
105342257
Membrane trafficking [BR:
crg04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
105342257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBC1D23_C
RabGAP-TBC
Rhodanese
RabGap-TBC_2
LPD5
Motif
Other DBs
NCBI-GeneID:
105342257
NCBI-ProteinID:
XP_011447450
UniProt:
K1PYY9
LinkDB
All DBs
Position
2:14737702..14753029
Genome browser
AA seq
679 aa
AA seq
DB search
MADGIDDTSWVTDLETALVESCDFGTIRNICKCRTVPDHLRAEVWQICLNVQNKGDALSA
FDGLYDLDEQGIIREDCRALVDKLGNEEEDKVSIVSDLESIVTFFSKSRNEKYSSENGWL
EVIQPLLALKLTRAQIYNCFYSIVNKFIPRDCVKGGKPFHLFRLLLQYHDPELSSFLDTK
RILPDLYCHSWFRSLFSAPCDLQVIQVMWDVYFQHGDQFLTFFMALVILVNARDQILTGE
LESKQSIAEMLASFPSGLEAEDIEDFCALAQYYASKTPQSFRRDYQSPLFGNNLIPGKEE
DLQVSQALCLPVSVAELLQNNNLAGGDGVRYFVVDCRPADQYNSGHLSTAFHLDANLMLQ
NPKEFSTAVQALLAAKQQSISSGSAAGGEHLCFIGSGREEEDQYVHMVIANFLQKHYQYV
SFAKGGYQSLHELLKDRLSEGLSSHNPKHCIVCNPDASHSSSDLENGEDFHRSGKEEENG
ESFFGKLTSTVKSKSAVMKQKLTDYIKNEHQTQESRHVSNTDRVGKRYRNMANVFSIGDD
DDGDEVGENSSDDDRKEVVNVEVWLKKPDIKYSCRCQEVIGNGYMFPSHLLVTDTHLYVL
REIPNRKNMAHIQARRALGSVVKITSKRKHPDFVTFKYGSVDGEEIQVTDIDRFLLPQAA
EATKIIKQQIIKVLDALDS
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggaattgatgacactagctgggtaacagaccttgaaacagcactagttgaa
agctgtgattttggaactataagaaatatctgcaaatgtcggactgttcctgatcatctt
agagcagaggtttggcagatctgccttaatgtccaaaataaaggggatgctctcagtgca
tttgatggactgtatgatctggatgaacaaggaattatcagagaagattgcagagctcta
gttgacaagctgggcaatgaagaggaagacaaggtgtcgattgtcagtgatctagaatct
attgtgacatttttttcaaaatccagaaatgaaaaatattcatcagagaatggatggctt
gaagtcatacagccactgttagctcttaaattaacaagagcccagatttacaactgcttt
tattccatagtgaacaagttcattcctagagattgtgtgaagggaggaaaacctttccac
ctgtttcgattgcttctacagtaccatgaccccgagctgagctctttcctggacacaaaa
aggatactacccgacctctactgtcactcctggttcagaagtttgttttctgcaccatgc
gacctacaagttatacaagtgatgtgggatgtgtactttcaacatggggaccagtttcta
acttttttcatggctcttgtcattttggtaaatgcaagagatcagatattgactggagaa
ttggagtccaaacaatcaattgcagaaatgctggcatcctttccatcaggactggaggct
gaagacattgaggacttctgtgctttagcacaatactacgcttctaaaaccccacagtcg
tttagaagggattaccagagtccattatttggtaataatttgatacctggaaaagaagag
gatctacaagtttcacaggcattgtgtttacctgtgtctgtggcagaacttctccaaaac
aacaacctcgcagggggtgatggtgttcggtatttcgtggtggactgtcgtcccgctgac
cagtacaacagtggacatttgtccaccgcatttcatctggatgctaaccttatgctgcaa
aacccaaaggagttcagcactgcagtacaggcattacttgctgccaagcaacagtccatc
tcttcaggctccgctgcaggaggagaacacctgtgttttatcggcagtgggagggaggag
gaggaccagtatgttcatatggttatagccaacttcctgcagaaacactaccagtatgtc
agctttgcaaagggaggctatcaaagtttacatgaactgctaaaagatagactctctgaa
ggcttatccagtcacaatcccaaacattgcatagtctgtaaccccgatgcatcacacagc
tctagtgatttggagaatggcgaggattttcatagatcaggaaaggaggaagaaaatggg
gaatcattttttggaaaattaacctctactgtcaaaagcaagtcagctgtgatgaagcaa
aagctaacagattatataaagaatgaacaccaaacacaagaaagcaggcatgtcagcaat
acagatcgtgtgggcaaaagatatagaaacatggcaaatgttttctctattggagatgat
gatgatggtgatgaggtaggtgagaactcttcagatgatgacagaaaggaggttgtaaat
gtagaagtctggctgaagaaaccggacatcaagtactcctgtagatgtcaagaggtcata
gggaatggatatatgtttccaagtcatttactggtaacagatactcatttatatgtgctc
cgagaaattccaaacagaaagaacatggcccacattcaagcacgccgagctctaggaagt
gtcgtgaaaataacatcgaaaaggaaacacccagactttgtgacttttaaatatggttcg
gttgatggagaggaaatccaggtgacagacattgacagattcttgctcccacaggcagca
gaggcaactaaaatcattaaacaacagattatcaaagtgttggatgcattagacagctga
DBGET
integrated database retrieval system
