Magallana gigas (Pacific oyster): 105342400
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Entry
105342400 CDS
T03920
Name
(RefSeq) serine/arginine-rich splicing factor 4
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105342400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
crg03041
]
105342400
Spliceosome [BR:
crg03041
]
Common components
Common spliceosomal components
SR proteins
105342400
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
105342400
NCBI-ProteinID:
XP_011447648
LinkDB
All DBs
Position
6:complement(49723405..49729084)
Genome browser
AA seq
325 aa
AA seq
DB search
MGTRVYIGHLSYHARERDVERFFKGYGRIRDVMLKNGYGFVEFDDYRDADDAVYELNGKE
LCGERVSIEHARGTVRGGGGGYRGDSYHRESSYSRRPMWIDKYGPPTRTEYRVIVENLSS
RVSWQDLKDYMRQAGEVTYADAHKQHKNEGVVEFASYSDMKRALDKLDETEINGRKIRLV
EDKPRRSRRSSRSRSRSRSRSRSRRSRSRSRSRSRSRSRSRKRRASSRSRSRSKSRSRSR
SRSRSASRGRSKSRSKSRDRSKSKSRSKSREKSKSKSRSKSRSKSKSRSKSKSPAKSRSP
SPSRTKSRSRSKSPAKEEPMEGEQN
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgggtactagagtctacattggccatttatcttatcatgctagagagcgagatgtagag
aggttcttcaaaggctatggtaggataagggatgtcatgttaaaaaacggctatggattt
gtggaatttgatgactacagagatgctgatgatgctgtgtatgaactgaatggaaaagaa
ctttgtggagaaagggtgtccattgagcacgctagggggacagttcgtggtgggggtgga
gggtaccggggagacagctaccacagggagagtagctacagcaggagacctatgtggata
gataaatatggtccaccaactagaacagagtatcgagttatcgttgagaatttgtcgtct
cgtgtcagctggcaggatctgaaagactacatgagacaagcaggggaggtcacctatgct
gatgcccacaaacagcataaaaatgaaggagttgtagaatttgcttcttactctgatatg
aagagagcactagataagttggatgaaacggagataaatggcaggaagattcgtctggtt
gaggacaagccaaggcgaagcaggaggagttcgaggagtcgctccagatcaagaagccgg
agtagatctagacgatccaggtctcgcagtcgctccagaagccggtccagaagtcgctct
cgcaaaagaagggcctcctcaagaagtcgcagccggagcaagtctagaagtcggagtcga
tccaggtcaagatccgcatctaggggcaggtccaagtcaagatccaaatccagggacagg
tccaaatccaagtcaagatccaaatcaagggaaaagtccaaatctaagtctagatccaaa
tcaaggtcaaagtcgaaatcaaggtcaaagtccaaatctcctgctaaaagtaggtcacca
tcaccatcaaggaccaagtccagatcgaggtccaagtccccagcaaaggaggagccaatg
gaaggagagcagaactga
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