Magallana gigas (Pacific oyster): 105342403
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Entry
105342403 CDS
T03920
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31-like isoform X1
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105342403
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
crg03041
]
105342403
Spliceosome [BR:
crg03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
105342403
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
105342403
NCBI-ProteinID:
XP_065922615
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Position
7:complement(51787240..51799842)
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AA seq
417 aa
AA seq
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MVARPVEADPEYQLIVEANNITVEIDNEINVIHKFTRDHYSKRFPELESLVPTPLEYIRT
VHKLGNNILEISKSNEVLQEILTPATIMVVSVTASTTQGSELTPEELAVVNEACKMAVDL
TECKAKIFEYVESRMSFIAPNLSIIVGASIAAKLMGTAGGLTNLSKMPACNVQILGAQKR
TLSGFSTAAILPHTGHVYYSEIAQKTPPDLRKKAARLVAAKCTLAARVDSFHESVDGAIG
DSLRAEIEQKLDKLQEPPPVKTVKPLPAPIEQSRKKRGGRRARKMKERLGLTEVRKAANR
MNFGEIEEDAYQDDLGFSLGALGKSRSGKIRGPVVDSKTKARISKTLQAKVQKQNNVWGG
STTVKRQIAGTASSVAFTPLQGLEIVNPQAAERKVQAANAKYFSSTSGFHKIKKGDT
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggtggcgcgtccggtagaggctgacccagagtatcagctgattgtggaagcaaacaac
atcaccgtagagatcgataatgaaataaatgtgattcacaagtttacaagagatcactac
tctaagaggttccctgaactggaatcactcgttcccacaccactagagtacattaggact
gtacataaacttggcaacaacatcctggagatctccaagagcaatgaagttttacaggag
atcttgaccccagctaccataatggtggtcagtgtcacagcgtccactacacaggggtca
gagctgacccccgaggaactggctgttgttaacgaagcatgtaaaatggccgtcgacctg
acggagtgcaaggctaagatctttgagtatgtggagtctcgtatgtccttcatcgccccc
aatctgtccatcatcgtgggagcctccatagccgccaaactcatgggaactgctgggggc
ctgacaaatttatccaaaatgccggcctgtaacgttcaaatacttggtgcacagaaaaga
accttgtctggattttcaacagccgccattctcccccacacagggcacgtgtattacagt
gaaatcgcccagaaaactccgccggacctgaggaagaaagcggcccgtctagtggctgcc
aagtgtacactggctgcccgggtggacagcttccacgagagcgtggacggagccatcggt
gacagcctaagggcagagatcgagcagaaacttgacaagcttcaggaaccaccccccgtc
aaaacggtcaaaccactgccagcccctattgagcagtcccggaaaaaacgaggaggaaga
agggcaagaaaaatgaaagaaagattaggattaacagaagttagaaaagcggccaacaga
atgaactttggagagattgaggaagatgcttatcaagatgatctgggattttctctcgga
gctttaggcaaatcgcggtccggaaaaatccgtgggccagtggtggactccaaaaccaag
gcccgaatctctaagactctacaggctaaagttcagaaacagaacaatgtttggggagga
agtacaacagtgaaacgacagattgctggaacagcgtccagtgtggcatttacaccccta
cagggacttgagatcgtgaacccccaggctgcggaacgtaaagtacaagccgccaatgcc
aagtacttctccagtacatctgggttccacaaaatcaagaagggagacacgtga
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