Magallana gigas (Pacific oyster): 105342422
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Entry
105342422 CDS
T03920
Name
(RefSeq) NACHT and WD repeat domain-containing protein 2 isoform X4
KO
K24734
NACHT domain- and WD repeat-containing protein
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
crg04990
]
105342422
Domain-containing proteins not elsewhere classified [BR:
crg04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
105342422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_NWD2_C
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40
AAA_16
Beta-prop_EML
WDR55
Beta-prop_EML_2
DUF4062
NACHT
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_NUP159_NUP214
Beta-prop_TEP1_C
NPHP3_N
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
nSTAND1
NBCH_WD40
Beta-prop_TEP1_2nd
ATPase_2
AAA_22
Vmethyltransf_C
APAF1_C
RsgA_GTPase
DUF815
Motif
Other DBs
NCBI-GeneID:
105342422
NCBI-ProteinID:
XP_011447671
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All DBs
Position
10:1394797..1421530
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AA seq
1657 aa
AA seq
DB search
MEGSDGAGSEVGVEVNTEEEDKLWRVLTGSLQDLPPLSSKIVRIFTSSTFTDTTIERNSL
MENVYPKIKEYLRENYGLEFQVVDMRWGVRDEATDDHMTTHLCMQEIDNCQRLSIGPNFI
VFLGQKYGYRPLPTIIDAKELDMMRECVRDVPAEVELLDKWYKKDTNTVPPVYILQPIST
ILTNFNNKRHAKLQEADQEEWWDTFGRLCRILRKAAQVLFIAKKLDKDQMHNYFMSVTER
EVERGILKAKDVSEHCLAYVREITNINVLFRFAAKFIDFAARNVDGEAQKFLKTLRDEKL
PAKCPPSNLVKYTVDWNGKEGIDPETHAEYLKNFMEHFYSSVTRLVDEAMAKYEKLSSDA
VYTEQLQHLHACNNSVKVFQGRENIVNQIKDYIQGPSNRPFILYGESGCGKTSLTAKGAS
MSTKWWPENAEPVLVLRFLGTTPNSSSVIPLLVSLCSQIAFIYGQPKDEIPADELSPLVQ
HFKKLITFATAERPLNIVLDSLDQLSGADGGHSLAWLPTNLPENVKLIVSAIPSMYNLLE
TLQALVEVPENFVSVLPLGENLGGTILKFWLKNANRDISTEQWEIVNDALSKCNLPLYVK
LVFDEICRWKSYTPIKLTQLHYTIHDTIIKLYERIEIQHGKTLVAHALGYITAAKSGLSE
SELEDLLSLDEKVLNDVYQYHLPPVRRIPPLLWTRIRSDLPHYLSEREADGVNVINWYHR
QFIEAARERYFKNLNFVSGMHANISEYFLGIWGGGNPKPFTYSEQQRRMFHLSDLNGESD
RKVPEQPLAFYNEQGEVIRYNLRKLNELPFHLIRSHQYEQLYNHCLFNYRFLHAKLSSMP
LQSVLADFEDLMDHVFQKDAKLIADAIKLSSSILGHYPDMLGPQIIGRLLPYYQQNANVR
SLIQQCDSDGLEHCALVPSHHCLHTPGGPLQYSLEGHPFAPFGIGTTSNGKYLVSVSNKF
IIWDLATSDVFRQVVPGIGGIMQNLVISENDKYAVSYTNNNQVVVCTIMTGDFLVISPDI
KNKDESIIGTCISVTHVATWTTSMWYLYTLNGKCISSHVIELKMPLLSVELGSDDKTYLI
VKSGADSDSDMALEVHDKSMSPFEFHSAVAVSKDKMRVYACIAISDNAVAVYKRETDAWK
YDRTLGDNYDAIFSLKLSDDETYLAATIASGYKLWNLQKDTLVKLSLPPRTRNIPNKNPL
ISLVVFTKQNHFVVAAVRKNLYVWDTKQGNMVKVLDAHFGRIISIDAVTSGGNKIISSSI
DKTIKVWNFDNILEDVYSIDRLEKPIEFIHVSDESPYGVTTSRNCVGVWDLNTGKLVYTL
ETRAVVTLARITKDGKNVVAAETGKLLYWEVEQESSFRSVMQKDVAVLLLAEDDMRVIAI
SKQIGNKGLCKAYSFPDGETIFTIEYNYKTFKGGCITKEGNFLALPGADKSGDVLGVYQA
KTGTHLYNLQLKYTNYKELTGIRAMPHDTNQIVIIDEEKGNILDLKKKTLVRSVMRWNGM
AMKTGKSGLYAPNRGGLDLLDLKSGKTVRTLIPRVAEGVFSIDVMFTENDKHVVYYHSGH
RTLRVFRISDGTRIANFKAHAEVTYMAGTMNGETLVVGAVDGSLTILTIADPEYDENVEF
LQSLPSRKLARNANGMPGEGEVVTGKNSMGTALQVAS
NT seq
4974 nt
NT seq
+upstream
nt +downstream
nt
atggaggggtcagatggcgcggggtcagaggtcggggtggaggtcaacacggaggaggag
gataagttatggcgcgtgttgaccggaagtcttcaggatttacctcccctcagttctaag
atcgtcaggatcttcaccagctccacattcacagacaccaccattgagaggaattccctg
atggaaaacgtgtatcccaagatcaaagaatacctgcgtgaaaactatggactggaattc
caggtggtggacatgaggtggggagttagagacgaggccacagatgatcacatgaccacg
cacctatgtatgcaggagatcgacaactgtcagcgactgtccattggacccaacttcatt
gtttttcttggtcaaaagtatggatatcggcctcttcctacaataatagatgcaaaagaa
ctagacatgatgcgcgagtgtgtgcgtgatgttccggcggaagtagagttattagacaag
tggtacaagaaagatacgaatacagtgccccctgtctacatcctacagccaatcagcacc
atcctcacaaacttcaacaacaagaggcacgccaagctacaggaggcggaccaggaggaa
tggtgggacacgtttggcagactgtgtcggatcctgaggaaggcggcccaggtcctgttc
atcgccaagaaactggataaggaccagatgcacaattacttcatgtcagtcactgagcga
gaagttgaacgagggatccttaaagccaaagatgtgtccgagcactgtctggcctacgtc
cgagagatcaccaacatcaatgttctgtttcgttttgccgccaaattcattgactttgcc
gccagaaatgtagacggcgaggcgcaaaagtttttgaaaacactccgtgatgagaaactt
cccgccaaatgtccgccatccaatctggtgaaatataccgtggattggaacggcaaggaa
ggaatcgaccccgagacccacgcggagtatctcaaaaacttcatggaacacttctacagc
tctgtgactcggctcgtggacgaggcaatggctaagtacgagaagctgtcgagtgacgcg
gtgtacacggaacagctccaacatctacacgcctgtaataactctgtcaaagtgttccaa
ggccgagagaacatcgtgaaccaaatcaaagactacatccagggcccctccaacagaccc
ttcattctgtacggagaaagtggttgtggaaagacttctcttactgctaaaggagctagc
atgtcaacaaaatggtggccagaaaacgcagaaccagttctagttttgaggtttctagga
acgacccccaacagctccagcgtgattcctctgttagtgagtctgtgcagtcaaatagcc
ttcatttacggccagcccaaagacgaaattccggccgacgagttgtccccattggttcaa
catttcaagaaactgattacttttgccaccgccgagcgaccattaaatatcgtcctagac
tcattggatcaactctctggtgccgatggcgggcattcgttagcttggttacccacaaac
cttcctgaaaacgttaaacttattgtgtccgcgatcccaagcatgtataacctactggaa
acactgcaagctcttgttgaagtaccagaaaactttgtttcagttcttcctttaggggaa
aatttaggcgggaccattcttaagttctggttaaagaacgcaaatagagacatcagcact
gaacaatgggaaatcgtgaacgacgctttatctaaatgtaatttgccgttatacgtaaaa
ctagtgttcgacgaaatttgccgttggaagtcatacacgccgataaaactgacacaactt
cactatacaattcacgatactattattaagttgtacgaacgaattgaaattcagcatggc
aaaacacttgtagctcatgcacttggctacatcacggcagcaaaaagtggcttgtccgag
tcagaactagaagacctgctttcattggatgagaaagtgctgaacgacgtgtatcagtat
cacttgcctcccgtgcggcgtattcccccacttctctggacgcgcattagaagtgacctg
ccccattatttgagcgagcgtgaagctgatggtgtcaacgtcattaattggtatcatcgt
cagttcatcgaagcagcccgagaacgatacttcaaaaatctcaattttgtaagcggcatg
catgcaaatatttctgaatatttcctcggaatttggggtggcgggaatccaaaaccgttc
acgtactcggaacaacaacgtcgtatgttccatttatctgacttaaatggggaaagtgac
cgtaaagttccggagcaaccgctggcattttacaacgagcaaggggaagtaattcgatac
aacttacgaaaacttaacgagcttccattccatttgatccgctcccaccagtacgaacaa
ctgtacaatcactgcctcttcaactacaggttccttcacgccaaactcagttctatgccc
ctacagagcgttctcgctgacttcgaggacctgatggaccacgtgttccaaaaagacgca
aaactgattgccgacgcaataaagttgtccagctcaatcttaggccactaccctgatatg
cttggtccacagattattggcagactcttaccgtactaccagcagaacgcgaacgtccgt
agcctgatacagcagtgtgacagtgacgggctagaacactgcgcacttgttccctcacat
cattgccttcatacgcccggcgggccgttacagtattcgttggaaggtcatcccttcgct
ccttttggaattggcacgacatccaatggaaaatacttggtgtcagtttcaaacaagttc
attatatgggacttggctaccagtgacgtctttagacaagtcgttccaggcattgggggc
atcatgcaaaacctcgttatcagtgaaaacgacaaatacgcagtaagttacactaacaac
aaccaggttgtcgtctgcacaataatgacgggggactttctggtcatttcaccagatatc
aagaataaggacgaatcgatcataggaacttgtatttctgtgacccacgttgcaacatgg
acaacatcaatgtggtatctttatacgttaaacggtaaatgtatttcaagtcacgtgatt
gaactaaagatgcctttgttgtccgtggaactcggatcggacgataagacgtacttaatc
gtcaagagcggggccgactcggattctgacatggcgttggaagtacatgacaaatcaatg
tcacctttcgaatttcacagtgctgtggcagtatcaaaggataaaatgcgagtgtacgca
tgcatagcaataagtgacaatgcagtcgccgtatacaagcgggaaacggatgcgtggaag
tacgaccgaacgctgggcgataattatgatgccattttctctctaaaactttctgatgac
gaaacgtatttagctgctacaatcgcgagtggctataaactatggaatttgcagaaagat
accttagtcaaactaagtcttccgcctcgcactaggaacattccaaacaaaaaccctctt
atttctcttgtggtctttaccaagcaaaatcacttcgttgttgcagctgtcaggaaaaac
ttgtatgtgtgggatacaaagcaaggaaatatggtcaaagttttagacgcccatttcggc
cgaatcatttcaattgacgctgtgacttcaggtggaaataagataatttcctcatcaatt
gataaaactatcaaagtctggaattttgacaatattcttgaagacgtttattcgattgat
cgtttggagaaaccaatagaattcatccacgtgtccgatgaaagtccctacggcgtcacg
acgagcagaaactgtgtaggtgtttgggacttgaatacgggaaagttggtttacactctt
gagacacgtgctgtggtgacattagccagaattacaaaagatggtaaaaacgttgttgct
gccgagacaggtaaacttctttactgggaggttgaacaagagtcctcgtttagatcagtt
atgcaaaaagacgtcgctgttctgcttttagctgaagacgacatgagagtaatagcaata
tcaaagcaaattggcaacaaaggtctttgcaaggcgtacagttttccagatggagaaact
attttcacaattgaatacaattacaagacatttaaaggaggttgcattacaaaagaggga
aacttcctggctctacctggggctgacaagagcggggatgtactcggagtatatcaagca
aagaccggcactcatctctacaacctacagctcaaatacactaactataaggaactcacc
ggaatccgtgcaatgcctcatgacacaaaccaaatagtcatcatagacgaagagaagggg
aatattcttgatttaaaaaagaaaacgttagtcaggtcggttatgagatggaatggaatg
gcaatgaagacgggaaaatctggtttgtatgctccgaatcgaggaggcttagatttacta
gatctaaaatcaggaaagactgtccgcacgctaattccacgtgtagctgaaggtgtgttt
agtattgacgtcatgtttactgaaaacgacaaacatgttgtgtattaccattctggccat
cgtacactgcgagttttccgaatatcagatggaactagaattgcaaactttaaggctcat
gctgaagttacgtatatggcagggacgatgaacggcgagactttggtcgttggagcagta
gacgggagtttgacaattcttactattgctgatccagaatacgacgaaaatgtagagttt
ctgcagtctctacctagccgaaaattggcaaggaatgctaacggaatgccgggagaagga
gaagtggttacaggaaagaatagtatgggaacggctcttcaggttgcaagttaa
DBGET
integrated database retrieval system
