Magallana gigas (Pacific oyster): 105342477
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Entry
105342477 CDS
T03920
Name
(RefSeq) DNA repair and recombination protein RAD54-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105342477
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
crg03400
]
105342477
DNA repair and recombination proteins [BR:
crg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
105342477
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
Rad54_N
Methyltransf_24
Motif
Other DBs
NCBI-GeneID:
105342477
NCBI-ProteinID:
XP_034337080
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All DBs
Position
5:9691845..9700569
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AA seq
733 aa
AA seq
DB search
MRRSQAPSQRCVIPVSSQRNEQTKPVVKKARYDDQKERDDRTPLSTITNMPLLKYPDAKA
HEDFIKKILSKPFKIPIPNYKGPLAGRVLGIRRQGTRQPLHDPFEEGALILYSPPELSAH
EQLKADLDKQPVHVVVDPVLSKVLRPHQREGVKFMYDCVTGQRIPDNFGCIMADEMGLGK
TLQCITLMWTLLRQSPECCPLIDKVVVVTPSSLVKNWYNEVQKWLSGKINCLAIDSGVKK
EIDRQLNQFVTLKGGRNPHPILIISYETFRLHSTVMHKGEVGLVICDEGHRLKNSENQTY
QALNGLRARRRVLLSGTPIQNDLLEYFSLVHFVNGGILGTAQEFKKRFETPILRGRDADA
TDEDHKKGQEKLQELADVVNRCIIRRTQALLTKYLPVKVEQVVCCRLTQMQSELYKLLVR
SKGFEVEQDEKTSTTLSFITQLKKLCNHPDLIYEKCLQRAPGYDGTLDLFPPNHTTKIVR
PELSGKVLVLDRLLALIKAQTSDKVVLVSNYTQTLDLFETLCHQRRYLYVRLDGSMTIKK
RAKVVEQFNNPSSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARCWRDG
QKKQCFIYRLIATGTIEEKIFQRQTHKKALSSCVVDKEEDVERHFSREQLRDLFKLKEDT
SSDTHDTFKCKRCVNSIQVRGPPEGSDTNSDLSQWHHSADKRGLVDVVLKGAWDETISFT
FHHKSHEEQRQTV
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgagaagaagtcaagcacctagccaaaggtgtgtgataccagtttcatcccagagaaat
gaacaaacaaaacctgtggtaaagaaagctcgttatgatgaccaaaaagaaagagatgac
agaactccactatccacaattacaaacatgccactgctcaaatacccagatgcaaaggct
catgaggatttcatcaagaagatactctcaaagccatttaagattccaatacctaattac
aaagggccactggcaggaagagtgcttggaattcgacgtcaaggcaccagacagccattg
catgacccatttgaagaaggagcccttattctttactctcctccagagttatctgcccat
gagcagttgaaagcagacttagacaaacagccagtacatgttgtggtggatcctgtttta
tccaaagttcttaggcctcatcaaagagagggagtaaaattcatgtacgactgtgtcacg
ggccagagaattcctgacaactttggatgtatcatggcagatgaaatgggattgggtaaa
actttgcagtgcattaccctgatgtggactctgctgagacagagcccggagtgctgtccc
ctgattgacaaggtggtagtggtcactcccagcagtttggtcaagaactggtataatgaa
gttcagaaatggttgagtggaaaaataaactgtctcgctatagactctggagtaaaaaaa
gaaattgatagacaacttaatcaatttgtgactcttaaaggtggaagaaatcctcatcca
atcttaatcatttcctacgagacatttcgtctccacagtacagtgatgcataaaggagaa
gttggtctagtcatttgtgatgagggacacagactaaagaactcggagaaccagacatac
caggcgctgaatggactgagggcgcgacggagggtgctgctatcagggacccccatacag
aacgacctactcgagtacttcagtcttgtccactttgtcaatggcggaattctgggtact
gctcaggaatttaagaagcgatttgagactcctattcttcgtggtcgagatgcagatgcc
actgatgaagatcataaaaagggccaagaaaaactacaagaactggctgacgttgttaac
aggtgtatcatacgaagaacgcaagcacttctaactaaatatttgccagtaaaagtggag
caggtcgtttgctgtcgccttacacagatgcagtctgagttatacaaactcttagtcagg
tctaaaggctttgaagtggaacaggatgagaaaacatctacaactttgtctttcatcacc
cagcttaaaaagctgtgtaatcatcctgatctgatttatgagaaatgtctgcagagagcc
cctggatatgacggaacgctggatctgtttcctccaaatcacacaacgaagattgtaagg
cccgaactctccggcaaagtgttggtactcgatcgcttgttggctttgataaaggctcag
accagtgacaaagtcgttctggtgtctaactatacacagacgctggacctgtttgaaact
ctctgtcatcagagaaggtacttgtatgttcgacttgatggatcaatgacaataaaaaag
agagccaaagtggttgagcagtttaacaatccgtcatcacccgaattcatattcatgctg
agcagtaaagcgggtgggtgtggtttgaatctgattggagccaatcgtctggtgatgttt
gatcccgactggaatccagccaatgatgatcaggcaatggccagatgttggagagacgga
cagaagaagcaatgttttatttacagacttattgctacaggaacaatagaagaaaagatc
ttccagcggcagacccacaagaaagccttgagcagttgtgtggtggataaggaggaagat
gtggagaggcattttagccgcgagcagctccgcgacctgttcaagctgaaggaggacacc
agcagtgacacacatgacacgttcaagtgcaagaggtgtgtcaacagtattcaggttcgc
ggccccccagagggcagtgataccaattccgacctgtctcagtggcaccactctgccgat
aaaagaggactggtggacgtggttttgaagggggcgtgggacgaaaccatctccttcaca
tttcatcacaagtcacacgaagaacagaggcagactgtctga
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