Magallana gigas (Pacific oyster): 105342517
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Entry
105342517 CDS
T03920
Name
(RefSeq) TBC1 domain family member 22B isoform X5
KO
K20360
TBC1 domain family member 2
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crg04131
]
105342517
Membrane trafficking [BR:
crg04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
105342517
Retrieval pathways
105342517
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
105342517
NCBI-ProteinID:
XP_019928623
LinkDB
All DBs
Position
4:complement(32105203..32120875)
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AA seq
510 aa
AA seq
DB search
MSAFSNEPLKDGNKGGFWKKGSGFPGSIKPVYGAQHPPLQMMPRGKEDRSKSSNKKDAFQ
DFENKTSDAWDDGDDDLLVMANIQMSLRDVQSTAKAVMENHSKQFSAQNQQNAIKDHVTA
VPSATSSHGAGPGVGVRLNSGWRPPKSTPIRYTKDVVPDREATKLEKFRSVLAGPNTDLD
ELRKLSWSGIPKAVRATAWKILSGYLPASVDRREPTLQRKRHEYFSFIEQYYDTRHQEMH
QDTFRQIHIDIPRMNPLVAIFQQKLVQEILKDIPRMTSLAHLFQQQVVQEIFERILYIWA
IRHPASGYVQGINDLVTPFFVVFLSEFIENDVESENFEVSQLPKETLNTIEADSFWCTSK
LLDGIQDNYTFAQPGIQMKVSALQELVKRIDVPLYKHLEEQCVEFLQFSFRWMNNLLMRE
IPLRCTIRLWDTYQAEENGFADFHLYVCAAFLVRFTQDILREHDFQGILMFLQNLPTHHW
QNEEIGELLAEAFKLKYMFADAPNHLSKKK
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcatttagtaatgaaccattaaaagacggaaacaagggtggattctggaagaaa
gggagcggttttccaggaagcattaaaccagtttatggagcacaacatcctccacttcaa
atgatgcctaggggaaaagaagatcgatctaaatccagcaataagaaagatgcttttcaa
gactttgaaaacaaaacatctgatgcatgggatgatggtgatgatgatcttctggttatg
gcgaacattcagatgtcacttcgagatgtacagtctactgctaaagcagtcatggaaaat
catagcaaacagttcagtgctcaaaaccagcaaaatgccatcaaagatcatgtgactgct
gttccctctgccacctcatcccatggtgcagggcccggtgttggggtgcgtttgaacagt
gggtggaggccgcccaagtctacacccatcagatataccaaagatgtggtgccagataga
gaggccaccaagctggagaaattccgatctgtgttagcaggtccaaatacagatctagat
gaattacgaaaactcagctggtctggaataccaaaagccgtccgggcaacagcatggaaa
attttatcaggttaccttccagccagtgtggacagaagggagccaactctgcagagaaaa
cgtcacgagtatttcagttttattgaacaatattacgacacgcggcatcaggagatgcac
caagacacattcagacagattcatatagacattcctcgaatgaatccattagtggctata
tttcaacaaaaactggtacaggaaatccttaaagacattcctaggatgacctcactagct
caccttttccaacagcaggttgttcaagaaatatttgagcgcattttgtatatctgggcc
atcagacatccagccagcggctacgtgcagggaatcaacgacttggtgactcccttcttt
gtcgtatttctgtccgagttcatagaaaatgatgtggagtcggagaactttgaggtgagt
cagctacccaaggagacgttgaacacgatcgaggcggacagtttctggtgcacctctaag
ttgctggatggaatacaggacaactacacgttcgctcagcccggcatacagatgaaggtc
agcgcgttgcaggagctcgtcaagagaatcgatgttccgttatacaaacatttagaggag
cagtgcgtggagttcctacagttctccttccgatggatgaacaatttactgatgcgagaa
attcccctcaggtgtacaatacgactttgggatacatatcaggcggaggagaatggattt
gcagactttcatctctatgtatgtgcagcttttctagtcaggtttacccaggatattctg
agagagcacgattttcagggaattctaatgtttcttcaaaaccttccaacccaccactgg
caaaatgaggaaataggtgaacttttagcagaggctttcaagcttaaatacatgtttgct
gatgcaccaaatcatctcagcaaaaagaagtga
DBGET
integrated database retrieval system
