Crassostrea gigas (Pacific oyster): 105342546
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Entry
105342546 CDS
T03920
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
crg
Crassostrea gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
crg03400
]
105342546
Enzymes [BR:
crg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
105342546
DNA repair and recombination proteins [BR:
crg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
105342546
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
zf-GRF
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
105342546
NCBI-ProteinID:
XP_011447834
UniProt:
K1QBB0
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Position
LG8:24039284..24042800
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AA seq
527 aa
AA seq
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MKILTWNINGIRASKIKLSELFDSLDADVICLQETKVTRDMLDEPTAIVEGYNSYFSFSK
KRSGYSGVATFCKASATPVEAEEGLYKELNPKLEGKVGHYGDVSEFSSDELEALDAEGRA
VITKHKIRKHDGVEAELAIINVYCPRVDPDREDRLLYKLRFFALLQTRAEALLQSGCNVI
VLGDMNVKHKSIDRSEEDEVGTVTTPSRVWVNQFVWDTDRDPSIAAVENKEDFAGTTSSV
RGGLFVDSFRYFYPDQTGAYTNWCTLTSARETNYGRRLDYIFTNVELAQSDLKDCEILAD
VEGSDHCPVKAEYMAGFIPAEKCPPLCTKHMPEFCGKQIKLSSFFMKREKTIESSIEIKT
SQDTADQNHIKNTKNDKTEKMTLKRPSNGDKIGNAAKKKKSDSSDSRQGSLKGFFLKTST
KKEVVDIKMEEVSSETKGENHSSEMSVKVESTITVKSNTASAWKNLLQGPPPPPLCKGHQ
EPCVLRTVKKPGPNKGKQFFVCARGEGHSTNPEARCDFFKWVDYKKK
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgaagatactaacctggaatataaatgggattcgtgccagtaaaattaaacttagtgaa
ctatttgattctttggatgctgacgttatatgtctccaggaaaccaaagtcacaagagac
atgttagatgaaccaacagccatagttgaaggctacaattcttacttctctttttcaaag
aaacgaagtggctactctggcgttgcaacattttgcaaagcttcagcaacccctgtagag
gcagaagagggtctgtataaagaacttaacccaaaacttgaaggaaaagtgggtcactac
ggagatgtgagcgagttctccagtgatgaattggaggctctcgatgcagaggggagggca
gtcattacaaaacacaaaatcaggaaacatgatggagtggaagctgagttagccatcatc
aatgtgtactgtccgcgcgttgacccagatagagaggacaggctgctctacaagctgcgc
tttttcgctctactccagaccagggccgaggctcttctacagagtggctgtaatgttatt
gtacttggagacatgaatgtcaagcacaagagcattgatcgcagtgaagaagatgaagta
gggacagttacgactccgagccgggtgtgggtgaaccagtttgtgtgggacacggaccgg
gaccccagcattgctgctgtggagaataaggaggattttgctggcaccacaagctctgtg
agggggggactgtttgtggactcattcaggtacttctatccagaccagacgggggcctat
accaactggtgcactttgacctcggctcgagaaaccaactatgggcgacgtctggattat
atctttacaaacgttgaattggctcaaagtgatctcaaggactgcgagatattggcagac
gtagagggctcagaccactgtccagtcaaagcagagtatatggcagggtttattccggcc
gaaaaatgtcctcctctgtgcacgaaacatatgccagagttctgtggaaaacaaattaaa
ctttcttccttttttatgaagcgagagaagactattgaaagtagtattgaaataaaaacc
agtcaggacacagcagatcaaaaccatatcaaaaatacaaaaaatgataagacagaaaaa
atgactttaaagagaccaagtaatggagacaaaattggaaatgcagccaagaaaaagaaa
tccgattcaagtgattccaggcagggtagtctaaaaggatttttcctaaagacaagtaca
aaaaaggaggtggttgatattaaaatggaggaagtgtcctctgaaacaaagggagagaat
cacagctctgagatgagtgtaaaagttgagagtaccatcactgtgaaaagtaacacagca
agtgcctggaaaaacctcctccaaggtccccctcctcctcctctgtgtaagggacaccag
gagccctgtgtgttaaggacagtgaaaaagccggggcccaataaagggaagcagttcttt
gtgtgtgcccggggggagggtcacagtacaaatccagaagccaggtgcgacttcttcaag
tgggtggactacaaaaaaaagtga
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