Magallana gigas (Pacific oyster): 105342722
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Entry
105342722 CDS
T03920
Name
(RefSeq) putative nuclease HARBI1
KO
K23222
nuclease HARBI1 [EC:3.1.-.-]
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
crg03036
]
105342722
Chromosome and associated proteins [BR:
crg03036
]
Eukaryotic type
Gene silencing
Transposable elements
105342722
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DDE_Tnp_4
Plant_tran
DDE_Tnp_1
DDE_Tnp_1_2
Motif
Other DBs
NCBI-GeneID:
105342722
NCBI-ProteinID:
XP_034327180
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Position
4:complement(39704578..39709453)
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AA seq
348 aa
AA seq
DB search
MAACLLFIEVLRENEDKAFRRERVFRDRSQVLDMLTDSELIGRYRFPRRVILQLKYDVKD
FIQPQTLRSHAIPAHIQVLTCLRFLAKGDYLSETTDIHGISKSSGCLAVHRVVDAVFKAL
QNIEFLTRREHISRTKASFYKIAGFPNVIGAIDGTQIPIQGMGTDDEHLYVCRKGFHSIN
VQAVVDADLRFTNAVCKFPGATHDAFILQNSSLPNLIESLQDGGWLIGDSGYPLKEWLMT
PISNPRSGQEERYNSAHCRTRNAIERAFGVLKARFRCLHKTGGCLPYRPDKCTKIIECAM
RLHNLAINERVPLMVETEEEDDVQQPFAPVIPNNCTAAMLRDRLVQRF
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggccgcctgcttattgtttattgaagttttaagagaaaacgaagacaaggctttccgt
cgtgaacgcgttttcagagacaggagtcaagttctagatatgttgaccgacagcgagctc
attgggcgatatagatttccaaggcgagttattctgcagctgaaatacgatgtcaaagac
ttcatacagccacaaactttgaggtcgcatgccattccagcccacatccaggttctaaca
tgcttgcgtttcctggctaaaggagactacctctcagaaacaacagacattcatgggatc
tccaaatcatctggatgtctggctgttcatcgagtggtcgatgctgtcttcaaagctttg
cagaacatcgagttccttacaaggagggaacacatttcccgtaccaaagcgtcgttctac
aagattgctgggttcccaaatgtgattggtgccatcgatgggactcagatacccatacaa
ggcatgggaacagatgacgaacacctgtatgtctgcagaaagggttttcattccataaac
gtgcaagcggttgtagacgcagatttaaggttcacaaatgccgtctgcaaattcccagga
gcaacccatgatgcgttcattttgcaaaacagctccttgccaaatttgattgaaagcctt
caggatggaggttggctgataggcgattcgggttatccccttaaagagtggctgatgact
cctatcagcaacccgaggagtggacaagaagagcggtacaattcggctcactgtcgtact
agaaatgctattgaaagggcatttggtgtgcttaaagcacgtttcaggtgcttgcacaaa
actggaggatgcttgccttatagaccagacaaatgcacgaaaataattgaatgtgctatg
aggctacacaacttggccataaacgagagggtgcctctcatggtagaaactgaggaagaa
gatgatgtccagcaaccatttgctccagttatccccaacaattgtactgcagcaatgctg
agagatagacttgtacaaagattttga
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