Magallana gigas (Pacific oyster): 105342870
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Entry
105342870 CDS
T03920
Name
(RefSeq) ATP-dependent translocase ABCB1 isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
105342870
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
crg02000
]
105342870
04147 Exosome [BR:
crg04147
]
105342870
04090 CD molecules [BR:
crg04090
]
105342870
Enzymes [BR:
crg01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
105342870
Transporters [BR:
crg02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
105342870
Exosome [BR:
crg04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
105342870
CD molecules [BR:
crg04090
]
Proteins
105342870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
ABC_ATPase
RsgA_GTPase
AAA_22
AAA
Rad17
AAA_5
AAA_30
AAA_29
AAA_7
APS_kinase
AAA_21
AAA_18
AAA_28
G-alpha
SbcC_Walker_B
AAA_24
ATP-synt_ab
Zeta_toxin
MeaB
Dala_Dala_lig_N
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
105342870
NCBI-ProteinID:
XP_011448242
UniProt:
A0A8W8JVF0
LinkDB
All DBs
Position
3:complement(12848767..12862572)
Genome browser
AA seq
1295 aa
AA seq
DB search
MSDTDERAPLLSSEKGEKYSEEKTNEKKQKSAKSATFGQLFRYATALDKFLIFIGSVFAI
AVGGGWPALSVIFGELTDTFVSGPGGFTFICVNGSLVLNGTGNTTGNDSSSAADEFEDKM
STYAFYYLYIAAVVLVAGYLQIMCWTTACERQIHTIRKVYFRSIVRQQIGWFDKNQSGEL
TTRLADDINKIKDGLGDKFSFTFQYTAQFFSGFAIGFWKSWKMTLVMMSVTPILAVSAAI
MSVFIRNYTKKEQESYAGAGSVAEEVLSCIRTVISFNGQRQEQIRYESALKETRRIGIRK
SFVQGMMIGLIMFFMFGTYALAFWYGSDQVKDWYHSYCAPEREGISPGEVLTVFFCVMIG
SFSIGNAAPHLGSIFGAKGAAAEVFETIDNVPEIDGTSDKGEVPVSLDGDIDFVGVEFSY
PTREEVKVLKNFNLNIGRGQTVALVGSSGCGKSTVVNLIQRMYDPDSGRVLLDGKNIKEL
NTCWLRNNIGVVSQEPILFGMTIAENIKLGNTDATIQEIEDAAKAANAHDFITRLPNGYR
TLVGERGAQLSGGQKQRVAIARALVRNPRILLLDEATSALDSESEKIVQTALDQARLGRT
TVMIAHRLTTVQNADMIYVVDQGEIIESGTHSDLMEKKEFYYQLVQAQSLEPDDNGANGD
DNKAHIYKRQRSRVSSSDKSDNLVKRQTSRQVSTTEKGISKEKEAEEKEEEEEEVEKPKY
FRILRENFPECPFLIFGTFFAAIQGTTMPLFAVFFGEMIKVFIDIYNTDNVLWSMMFLAL
GGLNFVSHLFMHTNFGIAGERMTFRLRLKMFRAYLRQDAAYFDDPKHGTGSLTTRLATDA
SLIKTATGFRIGTILSSIVSLVAALAIAFYYGWKLALVVLGGVPILMLSSSLQIKVVMGK
HKDDQNKLEDAGKIASETIENIRTVQSLAREKYFYDLYSEHLESPLRSNLKQAQLYGFAY
GFSQCVVFAMYGGAFRFGAWQVSVGDMAPENVYKVFFAIAFTGMTIGQASSFLPDYSKAQ
HAAGILFKVLETIPGIDIYSSRGTYMTTVDGRVVFKNVSFSYPMRPEVRVLKSLSFTVEP
GQTVALVGPSGCGKSTAISLLQRMYDVEDGEINLDGKDIRDLNLNRLRSFISVVSQEPIL
FDCSIRENISYGLDTDVGMDDVIEAARKANIHDFITSLPAGYETVVGEKGTQLSGGQKQR
VAIARAIVRNPKILLLDEATSALDSESEKQVQAALDAAQKGRTCIVIAHRLSTIQNCDVI
FVIDDGQVVESGSHQALLSLKGVYSALVSAQQFTK
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatacggatgagagagcaccattgttatcttcggaaaaaggagaaaaatattcc
gaggagaaaaccaacgaaaagaaacagaaatcggcgaaatcagcaactttcggacagctg
ttccgatatgccactgccttggacaagttcctgatcttcatagggagtgtgttcgctata
gctgtggggggaggatggccagccctgtccgttatctttggggagctgaccgacacattc
gtctcagggccgggaggttttacctttatctgcgtcaatggaagcctcgttttaaacgga
accggaaacacgaccggaaacgactcgtcttctgctgcagacgaatttgaagacaagatg
agcacctatgccttctactatctgtacatagctgccgtggttctggtggcagggtacttg
cagataatgtgttggacaacggcgtgtgagcgacagattcatacgatccggaaagtctac
ttccggtccatagtcagacaacaaattggatggttcgacaaaaatcaaagcggggagctg
acaacacgcctagcagatgatattaataaaatcaaggatgggctcggcgacaagttcagc
tttaccttccaatacacagcgcagttcttctcgggattcgccatcggcttctggaagagc
tggaagatgaccttggtaatgatgtccgtgacccctatcctagcggtcagcgccgcaatc
atgtctgtgtttatcaggaactacacgaaaaaagagcaggagtcctacgcaggcgccgga
agtgtagcagaggaagttttgtcttgtatccgaaccgtcatctcattcaacggacagcgt
caggaacaaattagatatgagagcgcactgaaggaaacccgcaggatcgggatccgaaag
tctttcgtccagggaatgatgataggcctcatcatgttctttatgttcggaacctacgct
ttagctttctggtatgggtcagatcaggtcaaggattggtaccattcctactgtgccccc
gagagagaaggaatcagccctggggaagttcttacggtgtttttctgtgtgatgattggc
tctttttctatcggaaacgccgcgccccacttgggctcaatattcggcgccaaaggagcc
gcagccgaagtctttgagaccattgacaatgtgcccgaaattgatggcacatcggacaaa
ggggaggtgcctgtctctctggatggtgacattgactttgtgggggtggagtttagctat
ccaactcgtgaagaggtcaaggtattgaagaatttcaatctgaatattggtcggggacag
actgttgcattagtgggctctagtgggtgcggaaaatctaccgtggtcaacctcatccag
aggatgtatgacccagacagcggaagggttttgcttgacggtaaaaatataaaagaactc
aatacatgctggcttcgaaacaacattggggtcgtatcgcaggagcctattctgttcgga
atgacgatcgcagaaaacatcaaattaggaaacactgacgctaccatacaagaaatagaa
gatgctgccaaggccgctaatgctcacgatttcataacaaggctacccaatggatatcga
acactggtgggtgaaagaggagcccaactctccgggggtcagaaacagagagtagccatc
gccagagctctagtcagaaacccgcgaattctcctcttggacgaggcaacatcagccctg
gactcagagagcgagaaaatagtccagacagctctagatcaggctcgtcttggtaggaca
acagtgatgatagctcatcgactgacaacggtacagaacgccgacatgatttacgtggtg
gaccaaggggagataatcgagtctggtactcactcggatctaatggagaagaaagaattt
tattatcagctggtgcaggctcagtccctggagcccgacgacaacggtgctaacggagac
gataataaagctcatatatataaacgacaaaggtcccgtgtgtcgtcttcagacaagagt
gacaatctagtgaaaaggcaaacttctcgtcaagtatctaccactgaaaagggaatatcg
aaagagaaagaggcggaagagaaggaggaagaggaggaggaagtagaaaaacccaaatac
tttcggattttacgagaaaattttccggaatgcccgtttctaatttttggcacatttttt
gctgctattcagggaaccacgatgccgctttttgccgtgttttttggagaaatgatcaaa
gtatttattgatatttacaatacagataatgtgctttggagtatgatgttcttggcctta
ggtggactcaattttgtttcccacttgtttatgcacacaaacttcggcattgccggtgaa
aggatgacgttcaggctgagactgaagatgttccgggcttacctcagacaggacgccgcc
tactttgacgaccccaaacacgggacgggctccctgaccacacggctcgccacggacgct
tctctcatcaaaacggcgactggttttcggataggcacgattctgtcctccatcgttagc
ttggttgcggccctggcgatagcattttactatgggtggaagctggcgctggttgttctg
ggcggggtccctatactgatgttgtctagtagcttgcagatcaaagttgtaatgggtaaa
cacaaagacgaccagaataaattagaagatgctggaaagattgccagcgagaccattgaa
aacatccgtactgtgcagtctctcgccagggaaaaatatttctatgatctatactcagaa
catctagagagccctctaagatctaacctgaaacaagctcagttatatggatttgcctat
ggcttttctcagtgtgttgtctttgcaatgtatggtggtgctttccgttttggggcgtgg
caagttagtgttggagatatggcaccagaaaatgtgtacaaggtgtttttcgccattgct
ttcaccggaatgacaattggacaggccagttctttcttgccagattattccaaagctcag
catgctgccgggatactattcaaagttctggaaactattcctggaatagacatatactcc
tccagaggaacatacatgaccactgtggatgggagagttgtcttcaaaaacgtgtcgttt
agctatcccatgaggcccgaggtgagagtcctgaagtccctaagtttcacagtggagccc
gggcaaacggtagccctggtggggcccagtgggtgtggcaagtccaccgccatctcactg
ctccaacgaatgtacgatgtagaggacggagaaataaatttagatgggaaagatatccgg
gatctgaacttgaaccgtctccgttcgttcattagtgttgtcagccaggaacccattctg
tttgattgtagtattcgggagaatatatcatatggcttggacacagatgtaggaatggat
gacgtaatagaagcagcaaggaaagccaacattcatgactttatcacaagtcttcccgcg
gggtatgagacagttgttggagaaaagggcacacagctgtctgggggacaaaaacagaga
gtagcgatagcgcgtgccatcgtgcgcaaccctaagatactgcttctggatgaagcaacg
tctgctttagatagcgaatcagaaaagcaagttcaggcagctttggacgccgcccaaaaa
ggtcggacgtgtatcgtgatagctcatcgcctgtcaacgatacagaactgtgatgtaatt
tttgtgattgacgatggacaggttgtggagagtggctctcaccaggcgctgttgtcgtta
aagggagtgtattccgctctcgtcagcgctcagcaatttacaaaataa
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integrated database retrieval system
