KEGG   Magallana gigas (Pacific oyster): 105342976
Entry
105342976         CDS       T03920                                 
Name
(RefSeq) integrin alpha-4
  KO
K06483  integrin alpha 4
Organism
crg  Magallana gigas (Pacific oyster)
Pathway
crg04512  ECM-receptor interaction
crg04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:crg00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    105342976
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    105342976
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:crg04147]
    105342976
   04515 Cell adhesion molecules [BR:crg04515]
    105342976
   04090 CD molecules [BR:crg04090]
    105342976
Exosome [BR:crg04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   105342976
  Exosomal proteins of other cancer cells
   105342976
Cell adhesion molecules [BR:crg04515]
 Integrins
  Integrin alpha subunits
   105342976
CD molecules [BR:crg04090]
 Proteins
  105342976
SSDB
Motif
Pfam: FG-GAP Integrin_A_Ig_2 Integrin_A_Ig_1 FG-GAP_3
Other DBs
NCBI-GeneID: 105342976
NCBI-ProteinID: XP_011448411
LinkDB
Position
10:complement(30426297..30447868)
AA seq 1098 aa
MTVSMFTGWFGSILLLVKLCCHVGLGYNIDTEFPQIFRGPSGSRFGVTAEIVKTVSNSWI
LVGATRDNFTDKPEIPEPGNVYACPVNFNVDSKCSILPNLRTTESTSTVKPSGVFEQRQQ
LLGATIHVPKNRDSPILICAPKWRNLRFFSSNSELKSYQVVGNCFKLPNRNDLNQTTLNM
FRMNMTMIRDYYRDPMFGFSLADSPHPSFDVIFSTPNAGLASTGGTFAQAHNPTRTQPFI
IENSELITTYVSGSYFAYSLATGQFGGSGYYYVAGAPGFSNLHGVVGSFSILEVNGVSEQ
QVKLIEGLQIGGGFGQTLVIADVNADGHDDILVGAPNTYLDDVNKNRVIYDVGAIHVFYG
NGEPATLINQDPHTIMGTRKLGSRFGTAISGVGDLNKDGINDIAVGAPYEEGTGVVYIYN
GNTPRMEDKYSQRILGKDIRVGVSGFGYYISKFGEDLDENKYNDFAVGAYKSDEVVLLRA
RPIVEVRVYSRIDPDPVPLTSTGTSCGSQGSANPCFTASLCFDFSGEGTNKTYIDVEIFA
DTERGRPRVSFEGAGQQDSFNVSLFEIYSYRVRCLNVTLRTLVVDRQFFELIEIPVVLKT
TFRLSTESVPSTVRAILKRNVPTMLKSQVSFDTGCKSLTCFSNLQLVSLMDKNTFMIGQD
KDLSLNIVVKNFGEPSFKTELKIIYPSIFSYSGVRTEPFSEKITCTPMPTSGNTAVLSCR
LDTPFYAHMVVNVTIYFYLTDAIITNPDILSSSGLTFSSSVSTNHDTEPTDNTDTKTVQL
AMLTDVSLKIASSAEQILATNNTVSFTTSYTLYNDGPCQIEAAWIYFYFPVLYEEKVWID
EDNSMPTPSNIGDKCILKYHPEQVNVASGNSPASVKFTVSRKFVQRPIAQKPETSQTMFC
DDLGSGYDCAVVECTMYDVKPTETDKRTFSLAFELETDLLPPLQKGKAFLTFVTQAAVYP
TSSNKIPLYFINNVTGEVSVDILLSELFSPPAEEVEVWVIIVACLLSILLFIVVIVVLWK
CGFFERKKRKELNAFKRKTQMSIRSARSGGAGSVKSRRSNTAGSFRVKKMGDDHVKLHDK
KAEDNTDNSTMESATECK
NT seq 3297 nt   +upstreamnt  +downstreamnt
atgaccgtatcgatgtttactgggtggtttgggtcgatcttgctgttggtgaaactgtgt
tgccatgttgggctgggatataacatcgataccgaatttcctcagatattccgagggccg
agtggttcgagattcggtgttactgctgagatagtcaaaactgtgtctaattcttggatt
cttgtaggagccacacgagataactttaccgataaaccggaaataccagagcccggaaac
gtgtacgcatgcccagtcaacttcaatgttgattccaaatgctccattttaccgaatttg
cgaacaactgaatcgacgtcaaccgtgaaacctagcggagtgtttgagcaaagacagcaa
cttctaggggcgacaattcatgttccgaaaaatcgtgattctcctatactgatttgcgca
ccgaaatggcggaatttgcgcttcttttcatcaaactccgaactaaagtcgtaccaggtc
gttggcaattgtttcaaacttcccaatcgaaacgatctgaatcagacaacgctcaatatg
ttccgaatgaacatgacaatgataagggactactacagggatcctatgttcggattctct
ctggctgattccccgcacccatcctttgatgttatattcagtacaccaaacgcgggttta
gcatccacgggaggaacttttgcgcaggcgcacaacccaacacgtactcagccattcatc
atcgaaaactccgaactcattacaacctatgtatcaggatcttattttgcctatagtttg
gcgaccggacagttcggtggtagcgggtactactacgtcgctggagcgccggggttcagc
aatctacatggagtcgtgggatcgttttcgattctagaagttaatggagtctcggagcaa
caggtgaaattaattgaaggacttcagataggtggcggtttcgggcagacactagtgata
gcggacgttaacgctgacgggcacgatgatatcctggtcggggcaccaaacacgtacctt
gatgacgtcaacaaaaacagggtcatttacgatgtaggggccatacacgtattctatgga
aacggggagcctgcgacattgattaaccaagatccacataccattatgggtacacgaaaa
ctggggtcgcggtttggaacggcgatatcaggtgttggggacttgaacaaagacggaata
aacgatatagctgtgggcgctccatacgaagagggtacgggtgttgtttacatatacaac
gggaacacacctagaatggaggataagtactctcagagaatccttggaaaagatatacga
gttggagtttctggtttcggttattacatctcaaaatttggcgaggaccttgatgaaaac
aaatacaatgactttgctgttggcgcctataagtcggacgaagtagtcctcctgagagcc
cggcccattgtggaagttcgggtttattcccggatagatccggatccagtcccccttacc
tctaccggaacatcctgtgggtcacaggggtcagcgaatccgtgttttaccgcgagcctc
tgttttgatttctcaggggaaggcacaaataaaacatatatagatgtagaaatatttgcc
gataccgagagaggtcgacctagagtgtcgtttgaaggagctggtcagcaagacagcttt
aatgtctctctgtttgagatctacagctacagagtcaggtgtttgaacgtcacactacgg
actctggttgtggatcgccaattctttgagctgattgagataccagtggtgttgaagacg
actttccgcctgagtacagaatctgtaccctctacagtgagggccatattaaagaggaac
gtaccgaccatgcttaaaagccaggtctcttttgacactgggtgcaaatctttgacttgt
ttttcgaaccttcagctcgtctcgctcatggataagaatactttcatgattggtcaagac
aaagatctcagtttaaacattgtagtgaaaaactttggcgaaccgtcctttaagactgaa
ttgaaaataatatacccttctatattttcatactcgggtgttaggacagaacccttttca
gagaaaataacgtgcacccctatgccgacttccgggaacactgccgttttatcatgccgc
cttgacactccattttacgcccacatggttgtcaatgttacaatatacttttatctaacg
gacgctatcatcactaatccggatattttgtcctcctccggtttgacttttagcagcagt
gtatctaccaatcacgacacagagccaacagataacacagacaccaagactgttcagctg
gcaatgttaacggatgtttcattaaaaatagcctcctcagcggaacaaattctagcaaca
aacaacactgtatcgttcacaacaagctacacgctttataacgatggtccatgtcaaatt
gaggcagcatggatttatttctattttccggttctatacgaagagaaagtttggatagac
gaggacaactcaatgcctacgccatcaaatataggtgacaaatgcatcttgaaatatcac
cctgaacaagtcaacgtagcttccggaaattccccagcttctgtcaagttcactgtcagc
cggaagttcgtacagcggccaattgcgcagaaaccggaaacatcacaaacaatgttttgt
gatgacctgggtagtggttatgactgtgcagtagttgagtgcactatgtatgacgttaaa
cccacggaaactgataagagaactttttcattggcatttgaactggaaacagacctgctt
ccacccttacaaaaggggaaagcctttttgacgtttgtgactcaagcagcagtctaccca
acgtccagtaacaaaatcccactatattttataaataacgtcacaggcgaggtgtctgtg
gatatcttgttatctgagctgtttagtccgccggctgaggaggtggaggtttgggtcatc
attgtcgcctgtctcctcagtatattactcttcattgtggtcatcgttgtgctgtggaag
tgtggattttttgaaagaaagaaaagaaaagaacttaatgcattcaaaagaaaaacgcag
atgtcgattcgaagcgcgcgtagtggtggtgcaggctcagtaaaaagtcggcgtagtaat
acagcaggatcatttagggtcaagaagatgggggacgaccacgtgaaactccatgataaa
aaagctgaggataacaccgataattctacaatggaaagtgcaactgaatgcaaataa

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