Magallana gigas (Pacific oyster): 105342976
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Entry
105342976 CDS
T03920
Name
(RefSeq) integrin alpha-4
KO
K06483
integrin alpha 4
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg04512
ECM-receptor interaction
crg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105342976
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
105342976
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
crg04147
]
105342976
04515 Cell adhesion molecules [BR:
crg04515
]
105342976
04090 CD molecules [BR:
crg04090
]
105342976
Exosome [BR:
crg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
105342976
Exosomal proteins of other cancer cells
105342976
Cell adhesion molecules [BR:
crg04515
]
Integrins
Integrin alpha subunits
105342976
CD molecules [BR:
crg04090
]
Proteins
105342976
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP_3
Motif
Other DBs
NCBI-GeneID:
105342976
NCBI-ProteinID:
XP_011448411
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All DBs
Position
10:complement(30426297..30447868)
Genome browser
AA seq
1098 aa
AA seq
DB search
MTVSMFTGWFGSILLLVKLCCHVGLGYNIDTEFPQIFRGPSGSRFGVTAEIVKTVSNSWI
LVGATRDNFTDKPEIPEPGNVYACPVNFNVDSKCSILPNLRTTESTSTVKPSGVFEQRQQ
LLGATIHVPKNRDSPILICAPKWRNLRFFSSNSELKSYQVVGNCFKLPNRNDLNQTTLNM
FRMNMTMIRDYYRDPMFGFSLADSPHPSFDVIFSTPNAGLASTGGTFAQAHNPTRTQPFI
IENSELITTYVSGSYFAYSLATGQFGGSGYYYVAGAPGFSNLHGVVGSFSILEVNGVSEQ
QVKLIEGLQIGGGFGQTLVIADVNADGHDDILVGAPNTYLDDVNKNRVIYDVGAIHVFYG
NGEPATLINQDPHTIMGTRKLGSRFGTAISGVGDLNKDGINDIAVGAPYEEGTGVVYIYN
GNTPRMEDKYSQRILGKDIRVGVSGFGYYISKFGEDLDENKYNDFAVGAYKSDEVVLLRA
RPIVEVRVYSRIDPDPVPLTSTGTSCGSQGSANPCFTASLCFDFSGEGTNKTYIDVEIFA
DTERGRPRVSFEGAGQQDSFNVSLFEIYSYRVRCLNVTLRTLVVDRQFFELIEIPVVLKT
TFRLSTESVPSTVRAILKRNVPTMLKSQVSFDTGCKSLTCFSNLQLVSLMDKNTFMIGQD
KDLSLNIVVKNFGEPSFKTELKIIYPSIFSYSGVRTEPFSEKITCTPMPTSGNTAVLSCR
LDTPFYAHMVVNVTIYFYLTDAIITNPDILSSSGLTFSSSVSTNHDTEPTDNTDTKTVQL
AMLTDVSLKIASSAEQILATNNTVSFTTSYTLYNDGPCQIEAAWIYFYFPVLYEEKVWID
EDNSMPTPSNIGDKCILKYHPEQVNVASGNSPASVKFTVSRKFVQRPIAQKPETSQTMFC
DDLGSGYDCAVVECTMYDVKPTETDKRTFSLAFELETDLLPPLQKGKAFLTFVTQAAVYP
TSSNKIPLYFINNVTGEVSVDILLSELFSPPAEEVEVWVIIVACLLSILLFIVVIVVLWK
CGFFERKKRKELNAFKRKTQMSIRSARSGGAGSVKSRRSNTAGSFRVKKMGDDHVKLHDK
KAEDNTDNSTMESATECK
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtatcgatgtttactgggtggtttgggtcgatcttgctgttggtgaaactgtgt
tgccatgttgggctgggatataacatcgataccgaatttcctcagatattccgagggccg
agtggttcgagattcggtgttactgctgagatagtcaaaactgtgtctaattcttggatt
cttgtaggagccacacgagataactttaccgataaaccggaaataccagagcccggaaac
gtgtacgcatgcccagtcaacttcaatgttgattccaaatgctccattttaccgaatttg
cgaacaactgaatcgacgtcaaccgtgaaacctagcggagtgtttgagcaaagacagcaa
cttctaggggcgacaattcatgttccgaaaaatcgtgattctcctatactgatttgcgca
ccgaaatggcggaatttgcgcttcttttcatcaaactccgaactaaagtcgtaccaggtc
gttggcaattgtttcaaacttcccaatcgaaacgatctgaatcagacaacgctcaatatg
ttccgaatgaacatgacaatgataagggactactacagggatcctatgttcggattctct
ctggctgattccccgcacccatcctttgatgttatattcagtacaccaaacgcgggttta
gcatccacgggaggaacttttgcgcaggcgcacaacccaacacgtactcagccattcatc
atcgaaaactccgaactcattacaacctatgtatcaggatcttattttgcctatagtttg
gcgaccggacagttcggtggtagcgggtactactacgtcgctggagcgccggggttcagc
aatctacatggagtcgtgggatcgttttcgattctagaagttaatggagtctcggagcaa
caggtgaaattaattgaaggacttcagataggtggcggtttcgggcagacactagtgata
gcggacgttaacgctgacgggcacgatgatatcctggtcggggcaccaaacacgtacctt
gatgacgtcaacaaaaacagggtcatttacgatgtaggggccatacacgtattctatgga
aacggggagcctgcgacattgattaaccaagatccacataccattatgggtacacgaaaa
ctggggtcgcggtttggaacggcgatatcaggtgttggggacttgaacaaagacggaata
aacgatatagctgtgggcgctccatacgaagagggtacgggtgttgtttacatatacaac
gggaacacacctagaatggaggataagtactctcagagaatccttggaaaagatatacga
gttggagtttctggtttcggttattacatctcaaaatttggcgaggaccttgatgaaaac
aaatacaatgactttgctgttggcgcctataagtcggacgaagtagtcctcctgagagcc
cggcccattgtggaagttcgggtttattcccggatagatccggatccagtcccccttacc
tctaccggaacatcctgtgggtcacaggggtcagcgaatccgtgttttaccgcgagcctc
tgttttgatttctcaggggaaggcacaaataaaacatatatagatgtagaaatatttgcc
gataccgagagaggtcgacctagagtgtcgtttgaaggagctggtcagcaagacagcttt
aatgtctctctgtttgagatctacagctacagagtcaggtgtttgaacgtcacactacgg
actctggttgtggatcgccaattctttgagctgattgagataccagtggtgttgaagacg
actttccgcctgagtacagaatctgtaccctctacagtgagggccatattaaagaggaac
gtaccgaccatgcttaaaagccaggtctcttttgacactgggtgcaaatctttgacttgt
ttttcgaaccttcagctcgtctcgctcatggataagaatactttcatgattggtcaagac
aaagatctcagtttaaacattgtagtgaaaaactttggcgaaccgtcctttaagactgaa
ttgaaaataatatacccttctatattttcatactcgggtgttaggacagaacccttttca
gagaaaataacgtgcacccctatgccgacttccgggaacactgccgttttatcatgccgc
cttgacactccattttacgcccacatggttgtcaatgttacaatatacttttatctaacg
gacgctatcatcactaatccggatattttgtcctcctccggtttgacttttagcagcagt
gtatctaccaatcacgacacagagccaacagataacacagacaccaagactgttcagctg
gcaatgttaacggatgtttcattaaaaatagcctcctcagcggaacaaattctagcaaca
aacaacactgtatcgttcacaacaagctacacgctttataacgatggtccatgtcaaatt
gaggcagcatggatttatttctattttccggttctatacgaagagaaagtttggatagac
gaggacaactcaatgcctacgccatcaaatataggtgacaaatgcatcttgaaatatcac
cctgaacaagtcaacgtagcttccggaaattccccagcttctgtcaagttcactgtcagc
cggaagttcgtacagcggccaattgcgcagaaaccggaaacatcacaaacaatgttttgt
gatgacctgggtagtggttatgactgtgcagtagttgagtgcactatgtatgacgttaaa
cccacggaaactgataagagaactttttcattggcatttgaactggaaacagacctgctt
ccacccttacaaaaggggaaagcctttttgacgtttgtgactcaagcagcagtctaccca
acgtccagtaacaaaatcccactatattttataaataacgtcacaggcgaggtgtctgtg
gatatcttgttatctgagctgtttagtccgccggctgaggaggtggaggtttgggtcatc
attgtcgcctgtctcctcagtatattactcttcattgtggtcatcgttgtgctgtggaag
tgtggattttttgaaagaaagaaaagaaaagaacttaatgcattcaaaagaaaaacgcag
atgtcgattcgaagcgcgcgtagtggtggtgcaggctcagtaaaaagtcggcgtagtaat
acagcaggatcatttagggtcaagaagatgggggacgaccacgtgaaactccatgataaa
aaagctgaggataacaccgataattctacaatggaaagtgcaactgaatgcaaataa
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integrated database retrieval system