KEGG   Magallana gigas (Pacific oyster): 105343161
Entry
105343161         CDS       T03920                                 
Name
(RefSeq) DNA repair protein XRCC1
  KO
K10803  DNA-repair protein XRCC1
Organism
crg  Magallana gigas (Pacific oyster)
Pathway
crg03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:crg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    105343161
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:crg03400]
    105343161
DNA repair and recombination proteins [BR:crg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     105343161
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT
Other DBs
NCBI-GeneID: 105343161
NCBI-ProteinID: XP_011448712
UniProt: A0A8W8MNT2
LinkDB
Position
3:complement(36886018..36893973)
AA seq 626 aa
MPIITPQHVVSFSNAETNHPAENLLKPEGTYKWKVQAGKPATAVLQLEKATEIHSIDIGN
EGSAFVEVLVGKSTSTSDQDYEVLLVASSFMTPVESRNETNRNSVRMFGPEKLNKSVASQ
KWDRIKIVCTQPFNKNVSYGLSFITFHSPPEANEQKGKESSVKKIGAFTLKPESEDPINS
GLLFEKKKTESTPLTGAAAVRAASRLAEESRGTPVKSTDNKPEKKAATPSEKPSTSQTGS
KRKHALSDDEDEAPPPRPPMKKQSTSISSTASSLTGKDKPKVKRTKSDVSGLSKPFHKLL
EGVVFVMSGFQNPFRGELRDKAIEMGAVYKPDWKKGCTHLICAFQNTPKYNQVKGKGKIV
KKEWIQHMYKQKTSLPWRKYRLGDAETPEGSSEEELDDEDLAPAKKAPVKKSKLKEETKP
TPEKAASKGKSKKGVNFDDEDSGDKAVPMDYGGDTDSGGDTEDELERVKAKLASESKESN
PYGDSTDEDEPAKKSKPSPSKNNSNSKPSTSNQSGANKTGEDSDDSGVPDLPDYFTDKRF
FLYGDFPSGERRLLTRYITAYNGEIEDYMNDKVHYVITNSDWDKNFDDALSDHPQLVFVK
PKWIHTCHEKEKLMPYQHYIVIPKDD
NT seq 1881 nt   +upstreamnt  +downstreamnt
atgccaatcatcacaccacagcatgttgtatcattcagcaatgctgaaactaaccaccct
gctgaaaatttgttaaaaccagagggtacttataaatggaaagttcaagctggtaaacca
gcaacggctgttcttcagttggagaaggccactgaaatacattccatagacattggtaat
gaagggtctgcttttgtggaagttcttgttggaaagtcaacatcgacctcggaccaagat
tatgaggttcttcttgtggcctcgtcgttcatgacacctgtggagagccggaatgagaca
aacaggaatagtgtcagaatgtttggtcctgaaaagctcaacaaatcagtagcatcacag
aaatgggaccgcatcaaaattgtttgcacgcaaccttttaacaagaatgtgagttatgga
ttgtcctttatcacatttcattctccacccgaagccaatgaacagaaaggaaaagagagt
agtgtaaaaaagattggagcatttactctcaaacctgaaagtgaggatccaattaactca
ggattattgttcgagaaaaagaagacagaatcaacccctctgacaggagcagcagctgtt
cgagcagcatctaggctggcagaagaatccagagggactccagttaaatccactgataac
aaaccagagaagaaagcagccacaccatctgaaaaacccagtacaagccagactggatct
aaaaggaagcatgctttgagtgatgacgaagatgaagcccctccccccagaccaccgatg
aagaaacaatcaaccagcatcagctccacagcatcatccctgacaggaaaggacaaacca
aaagtcaaacggacaaagtctgacgtatcaggactaagcaagccattccacaagctgctg
gagggcgtggtgtttgtgatgagtggctttcagaaccctttccgaggagagctgagggac
aaggccatcgagatgggagctgtttacaaaccagattggaaaaaaggatgcacccacctc
atatgcgccttccagaacacaccaaaatacaatcaggtgaaagggaaggggaaaattgtg
aagaaagagtggatccagcacatgtacaaacagaaaacctctctgccttggaggaaatac
cgacttggagatgcagaaactccagagggatcaagtgaagaggagttggatgatgaagat
cttgcaccagctaaaaaggcaccagtcaaaaaatccaaactgaaagaggagacaaaacct
actcctgagaaggcagcatcaaaaggaaagtcaaagaaaggagttaactttgatgatgaa
gattctggagataaggcagttcccatggattatggaggtgacacagactcaggaggggac
acagaggatgaactggagagagtgaaagcaaaactggcgtcagaatccaaagagagcaac
ccctatggagattccacagatgaagatgagcctgcaaagaaatccaaaccctcaccatcc
aaaaataactcaaactcaaaaccgtcaacatccaaccaatcaggagccaacaaaacagga
gaggacagtgacgattcaggtgtgcctgatttacccgactatttcactgacaaacgtttc
ttcttgtatggagatttccccagcggtgagaggagactgctgaccagatacatcacagcg
tacaatggagagatagaggattatatgaatgataaagtccattatgtcatcacaaactct
gattgggataaaaactttgatgatgccctgtcagatcatccgcaactagttttcgtcaaa
cccaagtggattcacacatgccatgaaaaggagaagttaatgccatatcaacattatata
gtgattcccaaggatgactaa

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