Magallana gigas (Pacific oyster): 105343163 Help Entry 105343163         CDS       T03920                                  Name (RefSeq) pre-mRNA-processing factor 19   KO K10599   pre-mRNA-processing factor 19 [EC:2.3.2.27] Organism crg  Magallana gigas (Pacific oyster) Pathway crg03040   Spliceosome crg04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:crg00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     105343163   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     105343163  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:crg03041]     105343163    04121 Ubiquitin system [BR:crg04121]     105343163    03400 DNA repair and recombination proteins [BR:crg03400]     105343163 Enzymes [BR:crg01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      105343163 Spliceosome [BR:crg03041]  Complex B   Other components    Prp19 complex     105343163  Complex C    Prp19-CDC5 complex     105343163 Ubiquitin system [BR:crg04121]  Ubiquitin ligases (E3)   U-box type E3    105343163 DNA repair and recombination proteins [BR:crg03400]  Eukaryotic type   Other factors with a suspected DNA repair function    PSO4 complex     105343163 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  WD40_Prp19 Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40 WD40_WDHD1_1st Prp19 Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_WDR3_2nd WD40_CDC20-Fz WD40_Gbeta EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_Aladin Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_TEP1_C Beta-prop_WDR19_1st Beta-prop_SCAP NBCH_WD40 U-box Beta-prop_WDR41 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_DCAF4 Beta-prop_Nup120_160 zf-Nse eIF2A Beta-prop_DCAF12 Beta-prop_VPS8 Beta-prop_WDR35_TULP_N Beta-prop_ACSF4 ATG16 Motif Other DBs NCBI-GeneID:  105343163 NCBI-ProteinID:  XP_034318123 LinkDB All DBs Position 3:36926776..36933287 Genome browser AA seq 509 aa AA seqDB search MALCCAISNEVPEQPVISPVSGHIYERRLIEKYIKENGSDPMNGEKLGIEMLVDVKASAL VKPRPPSATSIPAILKSLQDEWDAVMLHSFTLRQQLQTARQELSHALYQHDAACRVIARL TKEVTAAREALATLKPQAGITAGAYIAPAPQPTYGAEAGPESAIQPMEETGMSEEVLQKL QDKATLLTAERKKRGKTVPEGLATTEDIKSFKQLASHTGLHSASVPGILALDICLKDTSK IVTGGNDKNAVVFNKDTEQVMAILKGHSKKVTSVIYHPEDEIVFTASPDATIRVWGVETA QCGQVIRAHDAPVTGISLHATGDYLLSSSTDMHWAFSDIRQGRVLTKVSDPSSQHALTCA QFHPDGLIFGTGTEDSMIKIWDLKGRLNVANFPGHQGPITSIAFSENGYYLATSAEDSVV KLWDLRKLKNFKTLQLTDKYEVRSLAFDQSGTYLSVAGSDVRVYLCKQWQELISFNDHTA MATGVRFGHNATFVASGSMDRSVKFFGIQ NT seq 1530 nt NT seq  +upstreamnt  +downstreamnt atggcgctgtgctgtgcaattagtaatgaggtgcctgaacagccagtcatttctcctgtg tctgggcacatttatgagaggcgccttattgagaagtacatcaaagaaaatgggtccgat cccatgaatggggagaaactaggaatagaaatgctggtagatgttaaagcttcagcactt gtaaaacctagacctccttctgctacaagtataccagcaatactcaaatcattacaagat gaatgggatgctgtgatgttacacagttttacattgaggcagcaacttcaaacagccaga caagaactttcccatgccctatatcagcacgatgcagcttgccgtgtgatcgctcgtctc accaaagaagtcacagctgctagagaagctttggccaccctcaaaccccaggcaggaata acagctggagcttacattgctcctgccccacaaccaacttatggagcagaagctgggcct gaatctgctattcaacccatggaggaaacaggcatgagtgaggaagtgctgcaaaaattg caagacaaagccacacttcttacagccgaaaggaaaaagagaggtaaaactgtaccagag ggactggcaacaacagaggatatcaaatcattcaagcagctggcctctcacacaggcctg cacagtgccagtgttcctggaatattggctttggacatctgcttgaaggacacttccaag attgttacaggtggtaatgacaagaatgcagttgttttcaacaaggacactgagcaggtc atggccattctgaaaggtcactcaaagaaggtcaccagtgtcatttatcatccagaagat gagatagtgttcactgcatcccctgacgcaaccatccgtgtgtggggtgtggagacagct cagtgtggtcaggtgatcagagctcacgatgcccccgtcactggaatcagtctccacgcc actggggactacctgcttagctcttctacagacatgcattgggccttttctgacattcga caaggacgcgttttgaccaaagttagcgatccatcatctcagcatgctctcacctgtgcc cagtttcaccctgatggtcttatttttggcactggtaccgaggactccatgataaagatt tgggatttgaagggaaggctgaatgtggccaacttccccggccaccaaggacccatcact agcattgctttctcagaaaatggttactacttggctacttccgctgaagattctgtcgtc aaattgtgggatttgagaaaactcaagaatttcaagacacttcaacttacagacaaatat gaggtgaggtcccttgcctttgaccagagtggaacgtacttgagtgttgctggatcagat gtcagggtttacctgtgcaagcagtggcaggagttgatttcattcaacgaccacaccgcc atggccacaggagtcaggtttggacacaacgcaacatttgtggcttcaggaagcatggat agatctgtcaaattctttggaatacaatga

DBGET integrated database retrieval system