Magallana gigas (Pacific oyster): 105343290
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Entry
105343290 CDS
T03920
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
105343290
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
crg02000
]
105343290
Transporters [BR:
crg02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
105343290
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
105343290
NCBI-ProteinID:
XP_011448899
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Position
3:44377723..44388369
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AA seq
589 aa
AA seq
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MAPSGTALVDGVAMVEKTKPVQERERWDKKIEFLLAVVGFAVDLGNVWRFPYVCFNNGGG
AFLLPYLVMLIFCGLPLFYMELALGQFQRCGCLTVWNRICPAFKGIGFAIIVIATYISWY
YNTIIAWCVYYFFSSMRADVPWKTCNNEWNLEKQCMRYPTDERYNDSTKLFCFDGENSTS
CIFKNQTQTPTEQYFEREVLGLQYADGINRVGGVNWIIALCLLGVFVLVYFAMWKGIKSS
GKFVWVTATMPYVVLLILLIRGCMLEGSLKGIIYYVTPVWSEIAKKEVWIAATAQIFFSL
GPGFGVLLALSSYNKLNNNCYKDALITSSINCFTSFFAGFAVFAVLGHMATIQGKEVRDV
ARSDVGLIFIVYPEAISTLQVSPVWAMLFFLMFITLGLDTTFGGLEAICTGILDEWPILR
KHRKLFVLFLMMYCFVGALATTTYGGIHVVQLLDSYVAPIALIFVVFLEAVSVSWLYGVE
RFSDDIKSMLGFRPGIFWRICWKFLSPAILLFLFVMSLIDHQPMPYADYAYPQWAIAVGW
LIVMSSLSFIPGYFIYILIITPGTFLERLRSVFIPVEVPDHGYAEPVPV
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggcccccagcggtactgcgctcgttgatggggtggctatggtagagaagacgaagcca
gtccaggagagagagaggtgggataagaaaattgaattcttgctggctgtagtcggtttc
gccgtcgatttggggaatgtttggagatttccttatgtttgttttaacaatggtggaggt
gcctttctgcttccgtatctggtaatgttgatattttgtggattacctctgttttacatg
gagttggcactcggccaattccaaagatgcggatgtctgacagtgtggaatagaatatgc
cccgcattcaaaggaattggtttcgccatcattgtcatcgccacctacatttcttggtac
tacaacacgatcatcgcgtggtgtgtgtactactttttctcctccatgagggcggacgtt
ccgtggaagacatgtaataatgagtggaacctagagaagcagtgcatgagatatccgacg
gacgagcgttacaatgactccacaaagctcttctgcttcgacggagaaaacagcacgtcc
tgtatcttcaaaaaccaaacccaaacgcccactgaacaatattttgagagagaagtgttg
ggacttcagtatgctgacgggatcaatcgagtgggcggggtcaactggataatcgctctg
tgcctactcggggtcttcgtccttgtatacttcgccatgtggaagggaatcaaaagttcc
ggaaagtttgtgtgggtgaccgccacgatgccgtacgtcgttctgctcattctgctgatc
cgcggctgtatgttggagggctccctgaaaggaatcatctactacgtgactccagtctgg
agtgaaattgcaaaaaaggaagtttggatcgctgctacggctcagattttcttctccctg
ggtcctgggttcggggttttgttggcgctatcaagctacaacaagctgaacaacaactgt
tacaaagatgctttgattacaagttccattaactgcttcaccagtttcttcgctggcttt
gctgtgtttgccgtattaggtcacatggcaacaattcagggtaaagaagtcagagatgtg
gcaagaagcgacgtgggacttatcttcatcgtgtaccccgaggctatatcaacgctacag
gtctccccagtatgggcaatgttgttcttcctaatgttcatcacacttggccttgataca
acattcggtggactagaagcaatatgtacggggattttggacgagtggcccatactacgg
aaacacagaaagctgttcgtgctcttcctgatgatgtactgctttgttggagcactggcc
actactacttacggcggaatccatgtggttcagttgctggactcctatgtcgctcccatt
gccctcatctttgtggtgttcctggaagctgtctctgtatcctggctatacggagtagaa
agatttagtgatgatattaagtcgatgctgggtttcaggcccggcattttctggagaatt
tgctggaagttcctcagtcctgctatactgcttttccttttcgtcatgtcgctgattgat
catcagccgatgccgtatgcggattatgcatacccccaatgggcgattgccgttggatgg
ttgattgtaatgtcatctttaagtttcatcccgggatattttatctatatacttatcata
acacctggtacctttctggaaaggctacgttcggtgtttatcccagtggaagttccggac
cacggctatgcagagccagttccggtctaa
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