Magallana gigas (Pacific oyster): 105343477
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Entry
105343477 CDS
T03920
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
crg03041
]
105343477
Spliceosome [BR:
crg03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
105343477
Other components
Complex C specific factors
105343477
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Ortholog
Paralog
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Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
DUF5099
Motif
Other DBs
NCBI-GeneID:
105343477
NCBI-ProteinID:
XP_065935210
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Position
3:complement(28471933..28481222)
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AA seq
817 aa
AA seq
DB search
MSSPEVEKFEITEDDLANEFYPRGGRRQTKNQAIYGMWANSDDEDTPGFGRGRRKKKDYT
APIGFVSGGIKQGSKIKKEGDDDDSSDSDKDDIVVQMPKPSATKPPPSRPQGRQGKQFAG
FGKTDVGFGEWERHTRGVGKKLLEKMGFKPGEGLGKHGQGITTPVEAVKRKGKAAVGAYG
TERSERSLADFPVHDSDEEEDKKFKEELSQWKKKPEIGKKKPKYVYKTAQEIIESGVGKK
KAAPSKASKVKVIDMTGKEKRVFSGYHAIATRHNRPDEEEDIMEPEPGQKKAFEMPELMH
NLNILVDMAEEDIITNDRKLRYEKDHIINMKHEKERLDTICDQEEAQIQKLKKVLDIVRM
CEERTQPGCDNPMELDECAAIFRSLQNDFYEEYVMYDLSSLAVALVFPLMRKYFSSWDPL
KDPSYGLHTIQQWKSLLEDYNNQYAGNSTDMDVFQRLLWDVWLPYLRTTILKWNVRACHP
LIEVLETWLPVLPSWIMENILDQLVLPRLLQEVENWNPLTDTMPIHSWLHPWLPLMKDKL
EPLYAPIRHKIANALTNWHPSDASAKVILQPWVKVFKPGHLEAFLVKNILPKLAMCMQEF
VINPHQQILDPWHWVMAWSDIIPIKYMVDMLEKTFFPKWRTVLCTWLSNMPNYDEITKWY
LGWKSLFSEEYLSQPSIRDNFNKALEIMNRAVSSHIQPGVKENMAYFSQMERRQMVDTSG
LSTTRSPPRQTTGPEPTYTRSVTAGTNYQPTFKDIIEKAAEENGLLFMPIAGKTQEAKQV
YRYGKVQIYLDRNVIFVFENQIWIPVSLQNLIMKAKP
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccccagaagtagaaaaatttgagataacagaggatgaccttgccaatgagttt
tacccaagaggaggaagacggcaaacaaaaaatcaggccatatatggaatgtgggcaaac
agtgatgatgaagacaccccaggatttggaaggggtagaagaaagaaaaaagactacact
gcacccataggatttgtcagtggaggaatcaaacagggctcaaagatcaagaaagaaggg
gatgacgatgactcctctgattcagataaggatgatatcgtggtacagatgcctaagccg
tctgccacaaaaccaccaccaagtagaccacaggggagacaagggaagcagtttgctggg
ttcggaaaaactgatgttggatttggagagtgggaaagacacaccagaggtgttggcaaa
aagttactggagaagatgggttttaaacctggagaaggattgggaaaacatggtcagggt
attaccacacctgtggaggcagtcaagcggaagggtaaagcagctgtaggggcttatggg
accgagaggtcagagaggtcactggctgatttcccggtccacgattctgatgaggaggaa
gacaagaagttcaaggaggaactctctcagtggaaaaagaaaccagaaataggcaagaag
aagccaaaatatgtctataaaacagcacaggaaattattgaatctggagtggggaaaaag
aaggctgcaccctccaaagcttcaaaagtcaaggtcattgatatgacaggaaaagaaaag
agagtcttttcaggataccatgccatagccacaagacacaacagacctgacgaagaggaa
gacattatggaacctgagccgggtcaaaagaaagcttttgagatgccggagttgatgcac
aacctgaacattttagtggacatggcagaggaggatatcatcacgaatgacaggaagtta
cgatatgagaaagatcacatcatcaacatgaagcatgagaaggagcgactggataccata
tgtgatcaagaggaggctcagatacagaaactgaagaaagttctggacatcgtgaggatg
tgtgaggaaagaacacagcccgggtgtgacaatcccatggaactagacgagtgtgcagct
atattcaggtccctgcagaatgatttctacgaggagtatgttatgtacgacctctcctct
ctagccgtagcattggtgttcccattgatgagaaagtatttctcatcttgggaccctttg
aaggaccccagctatggactacacaccattcagcagtggaagtctttactggaggactac
aacaatcagtacgctggaaactccaccgacatggacgtgtttcagagactcctatgggat
gtctggctgccctacctcaggaccaccattctgaaatggaatgtgcgtgcttgtcatcct
cttatagaagtgttagaaacatggctgccagtcctgccttcatggatcatggagaacatc
ttggatcagctggtgttgccacggttactacaggaagtggagaattggaatccactaaca
gacaccatgccaatccattcttggctgcatccatggctgcctctaatgaaagacaaactg
gagcctctgtatgcccccatacgtcacaagatagccaatgctctcacaaactggcatccc
tcggatgcctctgccaaagtcatcctacagccatgggtgaaggtgttcaaaccaggccat
ttggaggcttttctggtgaaaaacatcctccctaagctggccatgtgtatgcaggagttt
gtcatcaatccacatcaacagattctagatccttggcactgggtaatggcgtggtcggat
atcattcccatcaaatacatggtagacatgctggagaagacattctttccaaaatggcgg
actgtgttgtgtacttggcttagtaacatgcctaattacgacgagatcaccaagtggtac
ctagggtggaagtctctcttctcggaagaatatctttcccagccatccattagagacaat
ttcaacaaagctctggagataatgaaccgtgcagtgtccagtcatatacagcctggtgtg
aaggagaacatggcctacttttcacagatggagcggagacagatggtggacacatcaggt
ctctccaccacacgatccccacccagacagactactggcccagagccaacatatacaaga
agtgttacagctggcaccaattatcaaccgaccttcaaagatattattgaaaaagcggct
gaggaaaatggtctcctgtttatgcctattgctgggaaaacccaagaagctaaacaagtg
tatcgctatggaaaagttcagatttatttggacagaaatgtgatttttgtgttcgagaat
cagatctggattccagtttcattacaaaatctcatcatgaaggctaagccttaa
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