Magallana gigas (Pacific oyster): 105344042
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Entry
105344042 CDS
T03920
Name
(RefSeq) nuclear receptor ROR-beta
KO
K08533
RAR-related orphan receptor beta
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crg03000
]
105344042
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
crg03310
]
105344042
Transcription factors [BR:
crg03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
105344042
Nuclear receptors [BR:
crg03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
105344042
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
105344042
NCBI-ProteinID:
XP_065943509
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Position
6:complement(43609944..43613705)
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AA seq
488 aa
AA seq
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MEPVSVQRKGKKREKYTCSHEPLEFPSCRVCGKKSTGIHFGVYSCEACKTFFRRSFLRST
PYKCDKGGDCLINAEKQNGSRPCPACRLVKCLDLGMSKDGVKQGRYTMTQRTSVILEVQK
LRDQTSNGLATDPENTHPGIQGDRQIKDGCELDCNIFHQDSQDDGTLSETSGGSYTIHSS
SSSSNSPHIQDKEIVELAQEVGRTSIILGEESTKESGVPCSDKSEDILQRIMTGYGYLEH
FTKSMTNEEIQDILDKEWMKHTDKTKLFGKLEYLPTDQYNDIYEKTQLDVDGRKKLLSEA
KYEFMKMANDYVKFCKNIPFFSGLSLEDQKALLKCSHFEFFTILQHKGMNTEKEMCISYT
GKVLPLSETCPYTSKETLLSWAEFSEEVSKLQLSPEEFALMLGICVTFRDRCQLDHPDDV
ENIQKRLLETLEFTLSKSHYENKGRRLAKLLDLFVRLRVIGDEYLELYKVICQDPIMREN
LPEFLIYL
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggaacccgtaagtgttcaacgcaaaggcaagaaaagagagaaatacacttgttcacac
gagcctctggagttcccctcgtgtcgtgtgtgtgggaagaaatccacgggaatccatttt
ggggtgtacagttgtgaagcatgcaagactttcttccgtcgaagttttttaagaagtacc
ccttacaaatgtgacaaagggggagattgtttgatcaacgccgaaaaacaaaacggatct
aggccatgtccagcatgccgactggtaaaatgtctggatttgggaatgtcaaaagatggt
gtaaaacagggtcgttatacgatgacacaaaggaccagtgttatactggaagttcagaaa
cttcgagatcagacctcgaatggattggcaactgacccagaaaacacgcatccgggcatt
caaggggaccgccaaataaaagatggatgcgagttggactgcaatatatttcatcaagat
tctcaagatgatggaacgctttcagaaacgtcgggaggatcttacactattcattcttca
tctagttcatcaaattcacctcatattcaggataaagaaatcgtggaacttgcgcaggaa
gtaggacgaacctctataatcttaggcgaagaatccactaaagagagtggtgtcccttgt
tcagacaaatcagaggatattctccagagaataatgactggttacgggtatttggaacat
tttacaaaatctatgacaaacgaagagattcaggacattttagataaagaatggatgaaa
catactgataaaacaaaactgtttggaaaattagaatatctgccaacggatcagtataac
gacatttatgaaaaaacacaattagatgtagacggcagaaagaaattgctctcagaagcg
aaatatgaattcatgaagatggctaacgactacgtaaagttctgcaagaacattccattc
ttctcggggctaagtctggaagatcagaaagctctattaaaatgttcccatttcgagttt
tttaccattttgcaacacaaaggtatgaatacagaaaaggagatgtgcatttcgtatacc
ggaaaggtgctgcctctgagtgagacatgtccctatacaagtaaggaaacactgctaagc
tgggcggaattctcagaagaggtgtccaagcttcagctcagtccggaagaatttgcttta
atgctgggtatttgtgttacatttcgagacaggtgccagctagatcatccagatgatgtg
gaaaacattcagaagagacttttggagactcttgagtttacgttatccaaatcccattat
gagaataaaggacgccgtctggccaaactgttagacctgtttgtgcgcctgcgcgtgatt
ggggatgagtaccttgaattatacaaagtcatatgccaggacccaatcatgcgggaaaac
ctcccagagttccttatttatttgtaa
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