Magallana gigas (Pacific oyster): 105344218
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Entry
105344218 CDS
T03920
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg04080
Neuroactive ligand-receptor interaction
crg04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
105344218
04082 Neuroactive ligand signaling
105344218
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
crg04040
]
105344218
Ion channels [BR:
crg04040
]
Ligand-gated channels
GABA-A
105344218
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF6865
SIT
Motif
Other DBs
NCBI-GeneID:
105344218
NCBI-ProteinID:
XP_011450219
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Position
2:complement(53269398..53274551)
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AA seq
467 aa
AA seq
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MDRRLAFVLWVLIPTRVCFSNSPDVTSSVIDSLLSNYDIRLRPNFGDAAVDVGIELVVAS
FDTISEVNMDYTITIYLNQYWTDERLTHGNLSTSTSLTLTGDFADKIWVPDTFFANDKNS
FLHDVTEKNKMIRLYGNGSVVYGMRFTTTLACMMDLHNYPLDEQNCTVEIESYGYDMADL
YLHWRSGHHSVHGIQDIELPQFSIVEYRTVEKIESLLTGKYPRLSLSFKLHRNVGYFIFQ
TYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISNGVRSSLPRISYVKAIDIY
LVTCFVFVFAALLEYAAVNYTYWGKRAKKKRRIKEMTDRRVKSQEETKNSDVCYTTVNNP
DVSPVISLRGNKETQIDLETGNTSFIPRACMSRGYIPESLVKRKRSSSLKKQRQAATQGS
MTEEREKCKSKFLSIKDVNSIDRFSRLLFPLLFLIVNVVYWGFYLVL
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggaccgtcggttggctttcgtactgtgggtacttattccgacaagggtctgtttctct
aattccccggatgtaacctcgtccgtcattgacagtctccttagtaactacgacatcaga
ctaagacccaactttggtgatgctgccgtagatgtaggcattgagttggtggtggccagc
tttgatacgatctctgaggtcaatatggactacacaatcacaatatacctgaaccagtac
tggacggacgagagactgacccacgggaacctgtccacctccaccagcctcaccctcacg
ggagatttcgcagacaaaatctgggtcccggacaccttcttcgccaatgacaagaactca
tttcttcatgacgtcacggagaaaaataaaatgattcgtttgtacggcaacgggtccgtc
gtctatggaatgagattcacaaccacacttgcttgtatgatggacctgcataactacccg
ctagacgagcaaaactgtaccgtggaaattgaaagctatggttacgacatggcggatcta
tacctccactggagaagtgggcaccactctgtacacggcatacaagacatagagctcccc
cagttctctattgtggagtatagaacggtggagaagatagagagcctactgacagggaag
tatccccgactgtcgctcagtttcaagctccacaggaacgtgggctacttcatcttccag
acgtatcttccctccattctgatcgtcatgctgtcttgggtttcgttttggattaaccat
gaagcaacatcagcgagagtggctttaggaattacaaccgttctcaccatgactacgata
agtaatggcgtccgatcgtccttgccgcggatctcctatgtcaaggccattgacatttac
ttggtgacgtgttttgtgtttgtatttgccgccctgttggagtatgcggctgttaactac
acatactggggaaagagagcgaagaagaagaggcggatcaaagaaatgacagataggaga
gtgaaatcacaagaggagaccaaaaatagcgatgtgtgttacacaactgtcaacaatcca
gatgtatcgccggtcatctctctgagggggaataaagagacgcagatagatttagaaaca
ggaaacacgtcatttattccaagagcgtgtatgtcacgtggttacatcccagaatccttg
gtcaaaaggaaacgttcgtccagtttgaaaaaacagcgccaggcagcgacacaaggatcc
atgacagaggaaagagagaaatgtaaatctaagttcttgtccataaaggatgtcaatagc
attgacaggttttccaggttactgtttccgctgctcttcctgattgttaacgtagtgtac
tggggattctaccttgtgctgtga
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