Magallana gigas (Pacific oyster): 105344233
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Entry
105344233 CDS
T03920
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-5 isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg04080
Neuroactive ligand-receptor interaction
crg04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
105344233
04082 Neuroactive ligand signaling
105344233
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
crg04040
]
105344233
Ion channels [BR:
crg04040
]
Ligand-gated channels
GABA-A
105344233
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
105344233
NCBI-ProteinID:
XP_065933309
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Position
2:complement(53284046..53288357)
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AA seq
426 aa
AA seq
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MDVARLMVLLYFDVCFSDDLTLRENVTILLDNLLQTYDKSVRPAGRDGPLVIKTNMLVRS
MGPITESEMTYSLQCYLRQSWHDERLKFDLPNVTEVTLSNTFLKDIWKPNTYFLNGRLST
QPNITVPNVFVRIRKDGSIYMSRRLTINAKCPMNLLDYPMDAPVCPLLLAGYGYTTDEII
YRWQTSNKSGVEIYDDVTLSQFDIVSIWTANNTYSDALGTQSGLEVYFHLKRHIGFFMLQ
TYLPCTLIVCLSWVSFWINRDAAPARVLLGVTTILSTAAVGLIQRDGLPRVPYATALDVF
LNVCIFYNLAAIIQYSAVNYFTKILPKEGGASYEEDETENVLNEDQNGVLDWNSTIGKET
QTGCLILFCRCLLGNFRFRYNMVKSADAANGNSVSSIDILSRYIFPLSFCLFQAFYWAWY
LRFKLS
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcgcgaggctgatggttttgttatactttgacgtgtgcttttcagatgacctc
acactaagggagaacgtcaccatattgttagataacctgttacagacctacgacaagtcg
gtgcgacctgcagggcgggatggaccactggttattaaaaccaatatgctggtacggagt
atgggacctatcacagaatctgaaatgacatactccctgcagtgttacctaagacagagc
tggcacgacgaacgcctgaagtttgaccttcccaacgtcacagaggtcactctcagcaac
acgtttctcaaggacatctggaagcctaacacgtacttcctgaacggtcgcttgtctacc
cagcccaacatcaccgttcctaatgtatttgttcgaatccggaaggacggcagtatttac
atgtcccgcaggttaacaattaacgcaaaatgccccatgaatctcttggactatccaatg
gatgcccccgtttgtcctttgctgttggctggatatggttacacgacagatgaaatcatt
tacaggtggcaaacctcaaacaaatctggggtagaaatatatgatgacgtcacactatca
cagtttgatatagtctctatctggactgcgaataatacttactccgatgcattagggaca
cagtccggccttgaagtctactttcatctaaagcggcacatcggcttcttcatgctccag
acttatctgccgtgcactctgatcgtctgcctgtcatgggtctcgttctggataaaccga
gatgcagctcctgcaagagttcttttaggtgtgacgacaatcctgtccacagcggccgtg
ggtctgattcagagggacggacttcccagagttccctacgccaccgcccttgacgtcttc
ctgaacgtctgcatcttctacaacctagccgccatcatacagtactccgccgtaaactac
ttcactaagattcttcccaaagaaggaggagcgtcctacgaagaggatgaaacggaaaat
gttttgaatgaagaccaaaatggcgtgttggactggaattcgacaataggaaaagagacg
caaaccggatgtctgatcttgttctgtaggtgtcttctgggcaacttccggtttcggtac
aacatggtgaaatccgccgacgcagctaatggaaatagtgtcagcagtatagacatttta
tctagatatatatttccactttctttttgtcttttccaagctttttattgggcttggtat
ctccgatttaaactctcttag
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