Magallana gigas (Pacific oyster): 105344583
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Entry
105344583 CDS
T03920
Name
(RefSeq) uncharacterized protein isoform X1
Organism
crg
Magallana gigas (Pacific oyster)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
EGF_3
Motif
Other DBs
NCBI-GeneID:
105344583
NCBI-ProteinID:
XP_011450678
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Position
8:complement(35325997..35379039)
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AA seq
1804 aa
AA seq
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MMMVLFQVVKAWILVLIVIFKTVRVSSKSDLSSDQYATHSKAHLEYLSVSLEEERKISED
GPPKLETVGETLVVPHYDKLVNLDLIFNSKVSLILEDGEPGTPLSFSLEREKSPFGLPTS
ESLSLYSTSSFHGWDSLNVTVHVTDASPFGSPLGVWWFLCVVALTTIAVLYRVVPLFQAA
SPGEDVDSEASWTRIFKCMWRINSEPCRPQTQNVVAQTDHELRTTHPYVEQSQTTMSEAQ
TFREKLLRVWFGRDSSRRLRWLSLPAPVMVCVGVTLMAAVVCAVSSLSHNYYLRVRVPSD
THIRRIRSYSENPAISAISINSNSMALVTRVHIMDVKAMCKSDPTRCETYAICDTLQGNL
NCRCKRGYFVKHRECSACSTSCPDGYYMTHQCSAHQDLVCRECTQCQGTTYQAAPCSSTQ
DTICIDVNFPVSNVRWDATIKEPSNSTSISISSSSNVFMEALNNVRDEMTMLFLNSNQNQ
MEFPFIRKSGMEISIKVSQTFLIPEYVDLDHEDDAPFFFRDIFLTKNMKDRMTFLQRRYC
RDIVPDHYKMILDIIPDQFTVASMDTCNPTENDPCPEGFKEGDSYLNRNLYIKCPYSDGK
ASNFSQLFQNTNLMYCSLPNTLLTETFNLEKTEAQHLNFPSEDCKKSLELCQKCLNQCTQ
TSTSSEDVACCRVGCFSELACKRALSETCPKRPVECARGDVYRYSIEPNFQSLDRKFMCH
LQYKKPAHLYKVSYTVKLPSIQHSFKTRYFSPEVTDRGYHQKGEASQDFIRTEHDSRTKI
YEEVILTGTHFIDNTPMRFVVQPLKTPEQFNSRKNFKVRPQRQQSWQSSVYSTTVQFERP
FLYSSVTWNRGECDAKNFSKIYPQQPLHTAEKIVIDPTVYNVHGKFEYQATPLDSAAQIK
VEIKGDKSILSTFEEDIGPTTVNASSFTGSLEWLHTTRSWNITVNGTLLKCPGYLTMDVY
DQFMESYFGKYDIFVKCPDPQFSFSFILPRSRSDTPNVFAVFINDTTASHKILLTMLINP
TQIPVNSELVVKEHVISQFPWIPIIVILIFSGILVTIFVIAAFCISKIRKVTTNDVFKYP
GVTFLKDEDRSKQEDGARMIKTPISRSVTCCLVTLYVVYALMFTFSVLLGVFYIVQGPLI
GNLTIVSNTSAKIHQAVELRFHQMQEFETSEISHMYNQTRDRLRACSFHNLQEIQRISKQ
MQKQLDLYVKHFYLQNKTIETILTNTLEEKSKTLQEELSVFLREYNSTLQSQFKDVLSKY
HQFLRSLMRNDWLKFPEQLFIGQKDVVDSDRDRDHLLGFMDWLEINQVEETLHVTEDIMK
TLSSSLPKLNSNVKLSLSDDDLLINSLEDLTNQLTSYNFHILENELNFQPSAQHQNSSSS
QEKTKSHTSTASLIEKMRTILFPVFICVFLFMDFLLLLYRFTWLKQMFRKAKRGVEEKVA
MDSVAGKIYFILTGVSAEKCEGPRERHFSYSDSKDPYERKNDLLHYFQGSSKGKEQVLQQ
IYSQKRRDKPRPTSIHIVQGKAESYVLLKAIADFVYKHLISPLLWRIVLVGAFILIISLV
TMTTNDLVTIETATFLMDTKSILPQLHRQIEISNALLSDFAVLSNEMLAEFQSKTVMEVN
EINSLLGHTVQRHTSIVMSLVQELCSIENASPCQHTQPTLSLLDTLQGCNFMPIHPQYLQ
EFRDVTFMEYLHTELLPLVVTLRQILFNTCYILFGFACLMLISQIFMRLIIFYLLKTNRL
PKVTRYLVSNANECWKASPIGPHSNSSFYRSYSLIESCESGVVGDIDDHYRDPTTLHPTT
QPHN
NT seq
5415 nt
NT seq
+upstream
nt +downstream
nt
atgatgatggtgctatttcaagttgtcaaggcatggatcttagtcctgatcgtaattttc
aaaacagttcgtgtaagttcaaaaagtgacttgagcagcgaccaatatgccacacactcc
aaagcacacctggaatatttatctgtttctttggaggaagaacggaagatttctgaagat
ggcccaccaaaactcgagacggttggagagaccctcgttgtaccccattacgacaaactt
gttaatcttgatttaatttttaattctaaggtgtcccttattttggaggatggagagcca
ggaacacctctgtctttttctttggagagagagaagagtccgtttggacttcctacttct
gagtcactgtccctgtactcaaccagtagtttccatggctgggactctctgaatgtcacc
gtacatgtgacagatgcctccccctttgggtcaccactaggggtatggtggttcctctgt
gtggtagccctgacaacaattgctgtcctgtaccgtgtggttcctctgtttcaggccgca
tctccaggtgaagatgtggactcggaggccagttggaccagaatctttaagtgtatgtgg
aggataaatagtgaaccctgcagacctcagacccaaaatgtagtggctcagacggaccat
gaactccggacgactcatccgtatgttgaacaaagtcagaccaccatgagtgaagcgcag
acattcagggagaagctgcttcgtgtttggtttggccgcgattccagtcgaagactgcga
tggctgtccctgcccgcccccgtgatggtgtgtgtgggggtgacattaatggctgccgtg
gtgtgtgctgtctcctccctctcccacaactactacctcagagtacgagtcccctcagat
acccacatacgtaggatccgatcgtacagcgagaacccggccatttctgctatctctatc
aacagtaacagcatggcgctcgttaccagagttcatataatggatgtaaaagccatgtgt
aagagcgatccgacgagatgtgagacttatgcaatctgtgacacgctgcaaggaaatcta
aactgccgctgcaaacgaggctactttgtcaaacacagggagtgttcagcttgctcaacg
tcttgtccagatggttattatatgacccaccagtgctccgctcatcaggatctcgtctgc
cgagagtgtacccagtgtcaaggcaccacctatcaggcggctccctgctccagcacccag
gacaccatctgtatagatgtgaatttcccagtgagtaatgtccgatgggatgccaccatc
aaggagccaagtaactcaacctccatctccatctcctcctccagcaacgtgttcatggag
gccctgaacaatgtccgggacgagatgaccatgctgttcctgaacagcaaccagaaccag
atggagtttccgttcatccggaagtcgggcatggagatcagcatcaaggtgtcccagacg
ttcctgatcccggagtacgtagacctggaccacgaggacgatgctccattcttcttccgg
gatatcttcctgactaaaaatatgaaggatcggatgacgttcttacagcgccgctactgc
agggacattgtgcctgatcattacaagatgatactggacatcattccggaccagttcacc
gtggccagcatggatacctgcaaccccacagagaatgacccctgccccgagggtttcaag
gagggagactcgtacctgaacaggaacctctacatcaagtgtccctactccgatggaaag
gcaagtaatttttctcagttattccaaaacaccaacctgatgtactgttctctcccaaac
acacttctgactgagaccttcaatctggagaagacagaagcccaacatctaaattttcca
tcggaagactgcaagaagagtttggaattatgtcagaaatgcttgaaccagtgtactcaa
acatcaacatcttcagaggacgtagcatgttgccgagtagggtgtttcagtgagttagca
tgtaagagggcgttaagtgagacgtgtccaaagaggccagtggagtgtgcgagaggagat
gtatacaggtatagcatcgagcccaatttccaaagtttagacaggaagttcatgtgtcac
ctgcagtacaaaaagccagcccacctgtataaagtgagctatacggtgaagctgccttcc
atacagcacagcttcaagacacgctacttctccccggaggtcaccgataggggataccac
cagaaaggagaggccagtcaggacttcatccgcacggagcacgactcccggacaaaaatc
tacgaggaggtgatcctcaccggaactcactttatcgataacactcccatgaggttcgta
gtgcagccattgaagacgcccgagcagttcaattcaaggaagaacttcaaggtccgcccg
cagcggcagcaatcgtggcagagtagtgtgtactccaccaccgtgcagttcgagcggccg
tttctgtacagttctgtcacgtggaataggggagagtgcgacgccaagaacttctcgaag
atttatccccagcagcctcttcacacagcggagaagatagtgatagatccaaccgtctat
aatgtccatgggaaatttgaatatcaagccacgcccctagatagtgcagcccaaatcaaa
gtggaaatcaaaggagacaagtcaattctgtctacgtttgaggaggacattgggcccact
acagtgaatgctagtagttttactgggagtctggaatggctccacaccaccaggagttgg
aacatcaccgtcaatggtacccttctgaaatgcccaggttatttgacaatggacgtctac
gaccagttcatggagtcctatttcggtaaatacgacatcttcgtgaagtgtccagacccc
cagttttccttcagcttcatcctccccagatctcgcagcgacacccccaatgtgttcgct
gtcttcatcaacgacacaacggcttcacacaagatccttctgactatgctgatcaacccg
acccagattccggtcaactccgaactcgtcgtcaaggaacacgtcatcagtcagtttccc
tggataccgattatagtcattctgatcttttctggaattttggtcacaatttttgtgatt
gccgcattctgcatttccaaaattagaaaagtgacgaccaacgatgttttcaagtaccca
ggtgtgacttttcttaaggatgaggacagatcaaagcaagaggacggggcgaggatgatt
aaaactccaatctccaggagtgttacctgctgtcttgttacactgtatgttgtctatgcc
ttgatgttcacattctcggttttgttaggagtattctacattgtgcaaggaccccttata
gggaatttaacaatagtgtcgaacacaagtgctaagattcaccaggctgtggagctacga
tttcatcagatgcaggagttcgaaacttctgagatatctcacatgtacaaccagactcga
gatcgtctcagagcatgctctttccacaacttacaggaaattcaaagaatttccaagcag
atgcagaagcaattggatttatatgtgaaacatttttaccttcaaaataaaaccattgag
accattcttacaaatacactagaagaaaaatccaagactctccaagaagagctgtcagtt
ttcctcagggaatataacagtactttacagagtcagttcaaggacgtgctgtcaaagtac
catcagtttctgagaagtctgatgaggaacgattggttgaaattcccggagcagcttttc
attggtcagaaggacgtggtggacagtgatcgggacagggaccacctcctggggttcatg
gattggctggagattaaccaagtagaggagacacttcacgtcactgaggacatcatgaaa
acattatcctcatcgcttccaaaattgaattccaacgtcaaattatctctgtcagacgac
gatttgttgataaactcgctcgaggatcttaccaatcagctgacgtcttacaacttccac
atcttggagaacgagttgaacttccagccgtctgctcagcaccagaactcctcctccagt
caggagaagacaaagtcacacacgtccacggcgtcgctgattgagaagatgaggaccatc
ctgttcccagtgttcatctgtgtattcttgttcatggacttcctcctattgttgtatcgc
ttcacctggttgaagcagatgttcaggaaagctaagcggggcgtcgaggagaaagtagcc
atggactccgtggctggcaagatctactttattctgactggagtgagtgcggagaagtgt
gagggtcccagagaaagacattttagctatagcgatagtaaagatccctatgaaagaaag
aatgatcttctgcactattttcaggggtcttccaaaggaaaggaacaggtcctgcagcag
atatattctcaaaagcgtcgggacaaacccagacctactagcattcatattgtgcaggga
aaagccgagtcctacgttctgttaaaggctattgcagactttgtgtataaacaccttata
tctcctttgttatggagaatcgtgcttgtaggtgcttttattttaattatttctcttgtg
accatgacaactaatgaccttgttaccatagagacagctacttttctgatggataccaag
tccattttacctcagctccacaggcaaatagagatctccaatgctttgctgagtgacttt
gctgtgttgagtaatgaaatgctggcagaatttcaaagcaaaacagtcatggaagtgaat
gaaattaactccttattagggcatactgtgcagagacatacctctattgttatgagtctt
gtgcaggaattgtgttctatagaaaatgcatcaccatgtcaacacacacaaccaacgttg
tcactcctagacaccttacagggatgtaactttatgccaattcatccacaatatctccaa
gagtttagagacgtgacgttcatggagtacctccacacagagttgctgcccttggtggta
actcttcggcagatcctgttcaacacttgttacatcctgttcgggttcgcctgcctcatg
ctcatcagtcagatcttcatgcgactgatcattttctatcttctgaaaaccaatcgtctg
ccaaaagtcaccaggtacctggtgtctaatgccaatgagtgctggaaggctagtccaatt
ggtccccattctaattctagtttctaccggagttactcgctgatcgagagctgcgagagt
ggagttgtgggggacattgacgaccactacagagatcccactacccttcaccccaccaca
caacctcacaactag
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