Magallana gigas (Pacific oyster): 105344728 Help Entry 105344728         CDS       T03920                                  Name (RefSeq) splicing factor 3B subunit 3   KO K12830   splicing factor 3B subunit 3 Organism crg  Magallana gigas (Pacific oyster) Pathway crg03040   Spliceosome Brite KEGG Orthology (KO) [BR:crg00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     105344728  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:crg03021]     105344728    03041 Spliceosome [BR:crg03041]     105344728    03036 Chromosome and associated proteins [BR:crg03036]     105344728 Transcription machinery [BR:crg03021]  Eukaryotic type   RNA polymerase II system    Coactivators     SAGA/TFTC/STAGA complex      105344728 Spliceosome [BR:crg03041]  Complex A   U2 snRNP components    U2 snRNP specific factors     105344728  Complex B     105344728  Complex C    U2 SnRNP specific factors     105344728 Chromosome and associated proteins [BR:crg03036]  Eukaryotic type   Histone modification proteins    HAT complexes     STAGA complex      105344728     TFTC complex      105344728 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Beta-prop_RSE1_1st Beta-prop_RSE1_2nd CPSF_A Motif Other DBs NCBI-GeneID:  105344728 NCBI-ProteinID:  XP_011450897 UniProt:  K1RLF8 LinkDB All DBs Position 3:complement(20903042..20915781) Genome browser AA seq 1217 aa AA seqDB search MFLYNLTLQRATGITCAVHGNFSGSKLQEIIVSRGKILELLRHDPNTGKIYPVLSVEVFG MIRSLMPFRLTGGSKDYVVVGSDSGRIVILEYIAQKNIFEKVHQETFGKSGCRRIVPGQY LAVDPKGRAVMIGAVEKQKLVYILNRDASARLTISSPLEAHKANTLVYHMVGVDVGFENP TFACLEIDYEEADMDHTGEGAKNTQQLLTYYELDLGLNHVVRKYSESLEEHANFLISVPG GSDGPSGVLICSENYITYKNLGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF FLAQTEQGDIFKITLETDEDMVTEIILKYFDTVPVAANMCVLKSGFLFIASEFGNHYLYQ IAQLGDDDEEPRFSSASQLEEGEPHFFSPRPLKNLVQVDEMDSLSPITHCQIADLANEDT PQLYTLCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKKNIDDEFDAYIIVSFVN ATLVLSIGETVEEVTDSGFLGTTPTLSCSQLGDDALVQIYPDGIRHIRSDKRVNEWKTPG KKSIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKEMSSEVVCMALGRVPVGEQ RCRFLAVGLSDNTVRIISLDPSDCLSPLSMQALPEPSESLCIVEMGGTEAKEETGEPGTV GGLFLNIGLQNGVLLRTVLDNVTGDLSDTRTRYLGVRPVKLFRISMQGSEAVLAMSSRSW LSYTYQNRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVSHP LQHTPRKFVIHPETNNLIVIETEYNAYTEATKMERKQQMAEEMVEMVSAEEREMAAEMAA NFLNEERSESIFGAPKAGPGMWASIIRIINPISGNTLEKIQLEQNESVHSIALLKFASRG DDQFVLVGVARDLVLNPRSLTGGFLYLYQLEDGGESLKLLHKTPVEDVPGAIASFQGRVL IGVGRYLRIYDIGKKKMLRKCENKSIPNYVSAIHTVGNRIIASDVQDSFHFVRYKRQENQ LIVFADDTNPRWITASCSLDYNTVAGADKFGNITIIRLPGDVSDDVDEDPTGNKALWDRG LLNGASQKADVMMNFHLGEMVTSLQKATLIPGGSESLVYTTLSGGIGMLVAFTSHEDHDF FQHLEMYMRTEHPPLCGRDHLSFRSYYYPVKNVIDGDLCEMFNSMDPVKQKSVSEELDRT PSEVSKKLEDIRTRYAF NT seq 3654 nt NT seq  +upstreamnt  +downstreamnt atgtttttgtacaaccttacactgcagagggccactggcataacatgtgccgtgcatggc aacttctcggggtccaaattgcaagaaattattgtttccagaggcaaaattttagagctg ctacgacatgatccaaatacgggtaaaatttacccagtattgtctgtggaggtttttgga atgattcgctcactgatgccattcagattgactggtggatcgaaagattatgttgtggtt ggatctgattctggaaggattgtcattctagagtatattgcacaaaagaacatttttgaa aaggttcatcaggaaacattcggaaaaagtggatgtagaagaatagtccccggacagtac cttgcagtagatccaaagggcagggctgtcatgataggagcagtagagaagcagaaatta gtgtacattttgaacagagatgcctctgcaagactgaccatctcctcgcccttagaagcc cacaaagccaatacactagtttaccacatggttggggtggatgttggctttgaaaatcct acttttgcctgtcttgaaattgattatgaggaagctgatatggatcacacaggagaaggt gcaaagaacacacagcagctattgacttactacgagttggatttgggattaaatcatgta gttagaaaatactccgaatcccttgaagagcatgctaacttccttatatctgtacctgga ggcagtgatggtcccagtggagtcttgatctgttctgaaaattacatcacctacaaaaat ctgggtgaccagccagacatcaggtgtcccattccgaggagaaggaatgaccttgatgat cctgagagaggaatgatttttgtctgcagtgcaacacataaaactaaaagcatgttcttt ttcctggcacaaactgaacaaggagatatcttcaaaatcacactagagacagatgaagac atggtcacagaaatcatattgaagtattttgacacagttcctgttgcagccaatatgtgt gtgctgaagtctgggtttctctttattgcatcagagtttggaaaccattacttataccaa atcgctcagttaggagatgatgatgaagaacctagattcagcagtgcatcacaattagag gaaggtgaacctcacttcttctcgcctcgacctctgaaaaacctggtacaggttgatgag atggacagtttgtcacccatcacacactgtcagatagctgatttggccaatgaggacacc ccacagttgtatactctctgtggaaggggccccaggtccacattgagggtactaaggcat ggattggaggtctctgaaatggctgtgtccgaacttcctggtaaccccaatgctgtctgg actgtcaaaaagaatattgatgatgaatttgatgcatacattatcgtgtccttcgtgaac gctaccctggtactgtccattggagagactgtagaggaagtgacggactctggtttcctg ggaaccacaccaacactgtcctgctcacagctcggagacgatgctttggtgcagatttat cctgatggaattcgtcacatccgatcagacaaaagagttaatgagtggaagacgccaggg aaaaagagcattgtcaaatgtgccgtcaaccagagacaagtggttatagccctaactggg ggagaactggtctactttgaaatggacccaacaggacagttgaatgagtacacagaaagg aaggagatgtcctctgaggtggtgtgcatggccctgggtagagtccccgttggtgaacag aggtgtcgctttctggcagtaggcttgtctgataacactgtcaggatcatctctctggat ccctcggattgtttgtcaccactgagtatgcaggccttgccggagccttctgagtccttg tgtattgtagagatgggaggaactgaagccaaagaagaaacaggggagcctggcactgta gggggcctgttcctgaacattggacttcagaacggtgtattgctgaggacggtgttggac aatgttacaggggatctctcggacactaggactaggtacctgggagtaagacccgtcaag ttgttcagaatctcaatgcaaggctcagaggctgttttagccatgtccagcagatcatgg cttagctatacctatcagaacagatttcatcttacacccttgtcatacgaaacactggaa tacgcatcaggttttgcatcagaacagtgtccagaaggcattgtcgccatctctaccaac accttgagaattttggctttagagaaactgggagctgtgtttaaccaggtatctcaccct ctgcagcacacaccaaggaaatttgtgatacatccagagacaaacaatctgatagtgata gagacagagtacaacgcctatacagaggccacaaagatggagaggaaacaacagatggca gaggaaatggtagagatggtaagtgctgaggagagagaaatggcagcagagatggccgct aacttcctgaatgaagagcggtcagagagtatatttggagccccaaaggctggtcctgga atgtgggcatccatcatcagaattatcaacccaatctctggcaatacattggaaaaaatt cagctggaacagaacgaatctgtgcacagcattgccttgttgaagtttgccagtcgaggg gatgatcagtttgtattggttggtgttgcaagagacctagtgttaaatccacgatctttg actggaggatttctttatttgtatcaattggaagatggaggggaatccttgaagttactg cacaaaactcctgtggaagatgtgcctggggctattgcttcatttcagggtcgcgttctc attggagttggaagatatctaagaatatatgacataggaaaaaagaaaatgttaagaaag tgtgaaaacaagagcattcccaattatgtgtcggcaattcatacagttggcaaccgtatc attgcgtcggacgttcaggacagctttcattttgtgcgatacaagcgacaggagaaccag ttgattgtgtttgctgatgacacaaacccacggtggatcacggcctcctgttctctggac tacaacacagtggctggggcagacaaatttggaaacatcacaattatcagactacctgga gatgttagtgatgatgtggatgaggatcccacaggaaacaaagccttgtgggataggggt ctgctgaatggggcatcacagaaagctgatgtgatgatgaacttccatctgggtgagatg gtgacatccctgcagaaggccacattgatcccaggaggttcagaatctctggtctacacc accctgtctggaggaataggaatgctggtggcattcacttctcatgaggaccatgatttc ttccaacatttggagatgtacatgaggacggagcatccacccctgtgtggacgagatcat ttgtccttcaggtcctactactatcctgtcaagaatgtgatagatggagacctgtgtgaa atgttcaactcaatggatcctgtcaaacagaagagtgtgtcggaggagttggacagaaca ccaagtgaagtttcaaagaaacttgaagacatccgaaccagatacgctttctaa

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