Magallana gigas (Pacific oyster): 105344775
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Entry
105344775 CDS
T03920
Name
(RefSeq) RING-type E3 ubiquitin-protein ligase PPIL2
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105344775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
crg03041
]
105344775
03110 Chaperones and folding catalysts [BR:
crg03110
]
105344775
04121 Ubiquitin system [BR:
crg04121
]
105344775
Enzymes [BR:
crg01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
105344775
Spliceosome [BR:
crg03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
105344775
Complex C
U4/U6.U5 tri-SnRNP related factors
105344775
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
105344775
Chaperones and folding catalysts [BR:
crg03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
105344775
Ubiquitin system [BR:
crg04121
]
Ubiquitin ligases (E3)
U-box type E3
105344775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
zf-NOSIP
zf-Nse
SPATIAL
Motif
Other DBs
NCBI-GeneID:
105344775
NCBI-ProteinID:
XP_034336306
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All DBs
Position
3:54124206..54137491
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AA seq
523 aa
AA seq
DB search
MGKKQHQKDKLYLTNTEWRTEFGGYKGRSASGENSKFRRLPFSCCSLSFQPFENPLCTKE
GVVFDLMNIVPFLKKYGINPVTGEKLSAKELIKLNFHKNGDGKYHCPVTFKIFNENTHIV
AIRPTGNVFCMDAVERLNIKPSFFKDLLTDEPFTRKDIISIQDPTKIDKFNLNTFYHVRK
NLKYGDEDEDAARKNPMYHLKSVNAETRDVLTELEREYKPAEKKEEEKKKADFLNAAHYS
TGRVAASFTSTAMDPTTQHEAAIIDEDVLRYEIVKKNGKKGYVSMITNYGLLNLELHCEM
VPKTCENFIKLCMKGYYRDTKFHRLIRNFVIQGGDPTGTGTGGESAWGDAFNDEIKPNLT
HTGRGVLSMANSGPNTNKSQFFITFRSAKHLDGKHAVFGRVVGGLDTLDKVERIEVDKKD
KPKKDVIIEDCHVFVNPYEEADEELATKREEIIQKQEEELKAKRKYAYKAEPEDIAPKTY
KKGVGKYINPTAVKRSAVDTASVPPVKKKAAVEGTKFGNFSAW
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagaaacaacatcagaaagacaaattatatcttacaaatacagaatggaggaca
gagtttggaggatacaaggggcgctcagcctctggggagaattcaaagttcagaaggctt
ccattcagttgttgcagcctgtcattccaaccttttgaaaaccccctttgtaccaaggaa
ggagttgtgtttgatttgatgaacattgtcccattcctgaagaagtatggtataaaccca
gtcacaggggagaaactcagtgcaaaagaattgatcaagctgaatttccacaagaatgga
gatggaaaataccactgccctgtcacattcaaaatatttaatgagaacacacatatagtt
gcaatcagacccacagggaatgttttctgcatggatgcagtggaaagactgaatataaaa
ccaagtttcttcaaggacttgcttacagatgagccattcacaagaaaagatattatttct
attcaggatcctacaaagatagacaaatttaatttgaacacattttatcatgtgaggaaa
aacttgaagtatggagatgaagatgaggatgctgctcgaaaaaatcccatgtatcatctt
aaatctgttaacgcagagacacgggacgttctaacagagctagagagggagtataaacca
gcggaaaagaaagaagaggagaagaaaaaagcagactttctgaatgcggcacattactct
acagggcgggtggctgcctcttttacatcaacagccatggatcctaccacccagcacgaa
gcagccatcattgatgaggatgtgctgagatatgagattgtgaagaagaatggaaagaaa
ggttatgtgtctatgatcacaaactatggtctgttgaatcttgagctgcactgtgagatg
gtgcctaagacatgtgagaattttatcaagctgtgtatgaagggttactacagagacaca
aaattccatcgcctcattagaaactttgtgattcaaggtggggatccaacagggaccgga
acaggaggggaatcagcatggggtgatgctttcaatgatgaaataaaacccaacctgacc
cacactggtagaggggtgctcagcatggccaactcaggccccaacacaaacaagtcacag
tttttcatcaccttcagatctgcaaaacacctcgatgggaaacatgctgtgtttggaagg
gtggtggggggtctagacacccttgataaagtggagaggattgaagtggacaagaaggac
aaaccaaagaaagacgtcatcattgaggattgtcatgtttttgtgaatccatatgaagag
gcagacgaagagctggcaacaaaacgtgaggagataatccagaaacaggaagaggaatta
aaggcaaagaggaagtatgcgtacaaagcagaaccggaggacattgcacccaaaacgtac
aaaaagggtgtaggaaagtacatcaacccaacagcagtgaagaggagtgcagtcgacacg
gcttcagtgcctccagtcaaaaagaaagcagctgtagagggaacaaagtttggtaacttc
agtgcttggtag
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