Magallana gigas (Pacific oyster): 105344825
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Entry
105344825 CDS
T03920
Name
(RefSeq) ribonucleases P/MRP protein subunit POP1
KO
K01164
ribonuclease P/MRP protein subunit POP1 [EC:
3.1.26.5
]
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105344825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
crg03009
]
105344825
03016 Transfer RNA biogenesis [BR:
crg03016
]
105344825
03029 Mitochondrial biogenesis [BR:
crg03029
]
105344825
Enzymes [BR:
crg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
105344825
Ribosome biogenesis [BR:
crg03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
105344825
Transfer RNA biogenesis [BR:
crg03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
105344825
Mitochondrial biogenesis [BR:
crg03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
105344825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POP1_C
POPLD
POP1_N
GCV_T
Motif
Other DBs
NCBI-GeneID:
105344825
NCBI-ProteinID:
XP_065923862
LinkDB
All DBs
Position
7:complement(21462158..21466950)
Genome browser
AA seq
869 aa
AA seq
DB search
MDQFNRKRPHGGMTKNQAKKQKFNENILSEAPQAIDVIEYARSRAAELQLLDEATKKRKV
SQAVNGLMSISMRRRAMSHNVKRMPRRVREMVTIKANKHKKPSRKHRRRPKNLLQEYIRR
QKNKVWLETHIWHAKRFKMAEKWGYKIPYQPTNKSARASYRATQHHCQMIDVSYLCCIEI
LGKEENILNGVSSLCNSQTGPTVGAKMYLEGTREGNCVLYKQNQYPQRPICPATFFWRPK
SEREPLRQLWIWCHPSSFEELWKELEACMSMSEKCEVQDISVELSCSIEDMRKGQTLADI
ANSSMLNNNSKEDKMSTISEEGPKQEDRSKEPKETQDKTKKQKSKKRTSTEKASEEKFVK
VINRKSQIGKVFMTSLKDRLVRHRFIGPESQRILAQTLRIADIMFNNKETSYWWKEYYED
KKHSLDFNQQREFWDGVAQCQSAAELSPHAVIGLTVRDPRVIRAMKRNENSDTVSESMVV
EGIEAVKLMVSQEVSNSPIWDEEIRKTVTSTKKSDFEINQLKSEHLVPGSELMLGEEESR
IPVLVIQNPGTNPSAHSHSHYGNGWDLILPAGWSMAFWVASIYHGARAGGLRELQCLANE
QQIEHFPEDYPDTSAGREEEARVKSEKEAEHSRRPPAKRPNFTKLDVANPFSWAWDQLVH
CDKEDTSGFHVLRDRKDLNTLRKVVNISLGQKKKCSKSSESVERFAPYQDILSRHQKSLV
FVKISVNSKGCPEEMGTISIPTKEDVRKMKADKYFVGPLRSQQPDPELEDKKEKKKRAKL
LKKGVLNLQPQKTPENREVAKDNVDDGEREIIGYVKHGGFSLNNGHGAGKGFCSLAGLEK
LSESLPDERNLVLIRNPRTLQYRFARLSL
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atggatcagtttaacagaaaaagaccacatggcgggatgacaaaaaaccaagcaaagaaa
cagaaatttaatgaaaacatactgtctgaagccccacaagctatagacgttattgagtat
gccaggagtcgagcagcagaactacagcttctggatgaagctacgaaaaaaagaaaagtg
tcacaagcagtgaatggactgatgtccatttcaatgagacggagagcaatgagtcacaat
gtgaaaagaatgccgcgtagagtgagagagatggtgacaataaaagccaacaaacacaaa
aaaccaagtagaaagcatcgcagacgtccaaagaatttactgcaggagtatatacgaaga
caaaagaacaaagtctggctagaaacccacatatggcatgcaaaaaggtttaaaatggct
gaaaaatggggttacaagattccctatcaaccaacaaacaaaagtgctcgagcctcctac
cgagctactcaacatcactgtcagatgatagatgtatcttatctgtgctgcatagaaatt
cttgggaaggaggaaaacattctgaatggagtctcttctctttgtaactctcaaactgga
ccaaccgtaggtgcaaaaatgtatttggaaggaacccgagagggtaattgtgtcttgtac
aagcaaaatcaatatcctcaacggcctatatgtcctgctacatttttctggagaccgaaa
tcggagcgggaaccactgcgacagttatggatttggtgtcatccatcttcttttgaagaa
ctgtggaaagagttagaggcatgtatgtcaatgtctgaaaaatgtgaggtgcaagatata
tctgtagaactaagctgttccatcgaagatatgagaaaaggacagacactggcagatatt
gcaaacagttctatgttgaataataattctaaggaggacaagatgtcaactatttcagag
gaaggacccaaacaagaagatagaagtaaggaacctaaagaaactcaggataaaacaaag
aaacagaaaagtaaaaaacgtacttctaccgaaaaggcaagcgaggaaaaatttgtaaaa
gtcatcaacagaaaatcccagattggaaaagttttcatgacctctctgaaagacagactt
gtaagacatcgtttcattggtccagagtctcagagaatcctggcacagactctccgtata
gcagatatcatgttcaataacaaggaaacttcttattggtggaaagagtactatgaagac
aaaaagcactctctggatttcaaccagcagagggaattctgggatggggttgctcagtgt
cagtctgctgcagagttgtctcctcatgctgtgattgggctgacagtgagagatccaaga
gtcatcagagccatgaaacgaaacgagaattctgacacagtttcagaatccatggttgtt
gagggtatagaagctgtcaagttgatggtcagccaagaggtttccaattcaccgatatgg
gatgaagagatcagaaagacagtaacatcgacaaaaaaatcggactttgaaatcaatcag
ctaaaatcggagcaccttgtcccagggtcagagttgatgctgggtgaagaagagagcagg
atccctgtgctagtcatccagaatcctggtactaatccctcagcacacagccacagtcac
tatgggaatggatgggatctcatcctgcctgcaggatggagcatggcattctgggtagcc
agtatttatcatggggccagagcaggaggtctccgtgaattacaatgtctggccaacgaa
cagcagattgaacacttccccgaggattatccagatacttcagcaggaagagaagaggag
gcgagggtgaagagcgagaaagaggcagagcacagcagacgacctcctgctaaaagacca
aattttactaagttagacgtggctaatccattttcttgggcatgggatcagctagttcat
tgtgataaagaggataccagtggattccatgttttgagagataggaaagatcttaatact
ctgcggaaagtggtgaatatttcactcggacagaaaaaaaaatgttcgaaaagtagcgaa
agtgtagaacgttttgctccttaccaagacatattgagtagacatcaaaagtctttagtg
tttgtcaaaatatcagtgaattccaaaggatgtccagaagagatgggaacaatctcaata
ccaactaaagaagatgtcagaaaaatgaaagcagataaatactttgtaggaccattaaga
tcccaacagcctgatcctgagctggaagacaagaaagagaagaagaaaagagcaaaactt
ctgaagaaaggtgtattgaatcttcaaccacaaaagacaccagagaatagagaagtggca
aaagacaatgttgatgatggtgagcgggaaatcattggatatgtaaaacatggtggattt
tcacttaataatggacatggggctggaaagggattctgttctttagccggtttagaaaag
ctgtctgaatccttgcctgatgaaagaaatcttgttttaattaggaatcccagaacactg
cagtatagatttgccagactttcactatga
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