Magallana gigas (Pacific oyster): 105344987
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Entry
105344987 CDS
T03920
Name
(RefSeq) DDB1- and CUL4-associated factor 11
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crg04121
]
105344987
Ubiquitin system [BR:
crg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
105344987
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Cytochrom_D1
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
Beta-prop_HPS5
NBCH_WD40
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
YunG
Beta-prop_IFT140_1st
Beta-prop_LRRK2
Beta-prop_RIG_1st
PD40
Beta-prop_DCAF4
WD40_2
Motif
Other DBs
NCBI-GeneID:
105344987
NCBI-ProteinID:
XP_011451239
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All DBs
Position
3:9650219..9665001
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AA seq
543 aa
AA seq
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MGTNNSTHQPRMSVSETDSRPSTSHQEEPQDVQAILAYLIRSGQVRILTNDEDDVDSKEE
DSDGCEFYGPARPPQEDPHPNTEELDRSDIKEEVMRSSGRATKRDMKPTVLHMLQNREMG
RNKKQQFTLEDQRVINCQYLPNQMSVMANYRHKTFCGTYSKSGNIFLSASQDQNIRIYNT
EDDNFDLIKRIRARDVGWSVLDTAFSPDGNYLIYSSWSDAIHLCNIHGDYETHIPLPLNP
RTHSFAIFSLTFSSDNTEILGGANDGCLYVYDRESNSRTLKIAAHDDDVNAVAFADDSSH
ILFSGGDDGLCRVWDRRTLKESSPEPVGTFAGHLDGITYIDSKGDARFLISNSKDQTIKL
WDVRKFSPSVGVEATKKAVATQNWDYRWEQVPRSVTKKRRIEGDSSVMTYRGHSVLHTLI
RCHFSPEYTTGQRYIYTGCATGALVIFDLLTGKVVSRLKGHNQCTRDVSWHPYKNIIMTS
SWDGTVKKWDYQHQEEEEEYPEESMESDDSDDATKRRKCQKRAKCTQALKRQTRCTNRQG
LFN
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggggaccaataactccacgcaccaacctagaatgagtgtttctgaaactgattctaga
ccatccaccagtcatcaagaggagcctcaagatgtacaagcaattctagcttatcttatc
cgtagtggccaggttagaattctgacgaacgacgaggatgatgtagacagtaaggaggag
gactcggatgggtgtgagttttacggtccagccaggcctccacaagaggacccacacccg
aatactgaagaattagataggagtgatattaaagaggaggtaatgcggtcgtctggacgg
gctaccaagagagacatgaagcccactgtattacacatgttgcaaaatagggagatgggt
aggaacaagaagcagcagtttactttggaggatcagagggtcatcaactgccagtacctg
ccaaatcagatgagtgtaatggctaactacagacataaaaccttctgtggaacctactcc
aaatctggcaacatcttcctttctgcatcacaagatcaaaatatccggatatataatact
gaggatgataactttgatctgataaaaagaataagagcacgagacgtgggatggagtgtt
cttgatacggcattcagtcctgatgggaattacctgatatactccagctggtctgatgca
attcatctatgcaacatccatggtgattacgagactcacatccccctacctctgaatccc
aggactcacagttttgccattttctccttgactttttcatcggataacactgaaattctt
ggaggagccaatgatgggtgtctgtatgtgtatgacagagaaagtaacagtagaacattg
aagatcgctgctcatgatgacgatgtgaatgctgtggccttcgctgacgattcgtcacac
atactgttcagtgggggagatgatggattgtgtcgggtgtgggatcgtcgaaccctaaag
gagtcaagtccagaaccagttgggacgtttgctggtcaccttgacggaattacttacatc
gactcaaagggagatgctaggttcctcatatctaactccaaagatcagacgatcaaattg
tgggatgtcaggaaattctcaccctcagttggagtagaggcaacgaagaaggctgtggcc
acacagaactgggactatagatgggagcaggtgccccgctcagtgaccaagaagaggagg
attgaaggagattcctcagtgatgacgtacagaggacactcagttctgcacaccttgatc
agatgtcacttctcacctgagtacaccaccggtcagcggtatatctatacaggctgtgcc
accggggctctcgtcatctttgatctgctgacagggaaagtggtctccagactaaagggc
cacaaccagtgtacaagggatgtgtcatggcacccttataagaatatcattatgacctct
tcatgggacggcacggtcaagaagtgggactaccagcatcaggaggaggaggaggagtac
cccgaggagagcatggaatcggatgattcggacgacgccaccaagaggcgaaagtgtcaa
aaaagggcaaaatgcacacaggcattgaaaagacagacgaggtgcacaaatcggcaagga
cttttcaattga
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