Magallana gigas (Pacific oyster): 105345025
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Entry
105345025 CDS
T03920
Name
(RefSeq) DDB1- and CUL4-associated factor 7
KO
K11805
DDB1- and CUL4-associated factor 7
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
105345025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crg04121
]
105345025
03036 Chromosome and associated proteins [BR:
crg03036
]
105345025
Ubiquitin system [BR:
crg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
105345025
Chromosome and associated proteins [BR:
crg03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
105345025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_EIPR1
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_WDR3_1st
WD40
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
MIOS_WD40
Beta-prop_EML_2
WD40_RFWD3
WDR55
WD40_Gbeta
EIF3I
Beta-prop_WDR41
WD40_MABP1-WDR62_2nd
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
105345025
NCBI-ProteinID:
XP_034318039
UniProt:
A0A8W8MUU4
LinkDB
All DBs
Position
5:47702545..47711108
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AA seq
348 aa
AA seq
DB search
MCALPGPGGQGKRKEIYKYEAPWTVYSMNWSIRPDKRFRLALGSFVEEYNNKVQIVSLDE
ETSEFTSKSTFDHPYPTTKIMWIPDAKGGYPDLLATSGDYLRVWRVSENESRLECLLNNN
KNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWGLETGQVLGRVNVVSGHVKTQLIAHD
KEVYDIAFSRAGGGRDMFASVGADGSVRMFDLRHLEHSTIIYEDAQHHPLLRLCWNKQDP
NYLATMAMDAMEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAADDHQALIW
DIQSMPRAIEDPILAYTAAGEINQIQWSSTQPDWIAICYNNCLEILRV
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgctctacctggtccaggtggccaagggaagcggaaggaaatttacaagtacgag
gcaccatggacggtttacagcatgaactggagtatacgcccagacaaaagattccgtttg
gctttaggaagctttgtggaggagtacaataataaagtacaaattgtttcccttgatgaa
gaaacatcagagtttacttcaaagagcacattcgatcatccatacccaacaacaaaaata
atgtggatccctgatgctaagggaggctatcccgatttgctggccaccagtggggattac
ctgcgggtttggagggtcagtgaaaatgaatctcggctcgagtgtctcctgaacaataat
aagaattcagatttttgtgctccactgacttcatttgattggaatgaagtggaccctaac
ctgctaggaacatccagcatcgatacaacatgtacaatatggggtctggagacaggacaa
gttctcggtcgagtcaatgtggtctctggtcatgtgaaaactcagttgattgcacacgac
aaggaagtgtatgacattgctttcagtcgggcaggaggtggaagagatatgtttgctagt
gtcggtgctgatggctctgtccgtatgtttgacctccgtcatctggaacactccactatt
atctacgaggacgcccagcaccaccccctcttacgactctgttggaacaagcaggatccc
aactacctggctacaatggctatggatgctatggaggtcattatcttggacgtgagggtc
ccctgtactcctgtggcccgcctgaacaaccaccgagcctgtgtgaatggaatcgcttgg
gccccacactccagctgccacatctgtacagcagctgatgaccaccaggccctgatctgg
gacatccagtctatgccacgggccatcgaggaccccatactggcttacaccgcagcaggg
gagataaaccaaatccagtggtcatccactcaacccgactggatcgccatttgttacaac
aactgtctcgaaatcttacgtgtctag
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integrated database retrieval system
