KEGG   Magallana gigas (Pacific oyster): 105345086
Entry
105345086         CDS       T03920                                 
Name
(RefSeq) denticleless protein homolog
  KO
K11790  denticleless
Organism
crg  Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:crg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:crg04121]
    105345086
Ubiquitin system [BR:crg04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     105345086
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 WD40_WDHD1_1st WDR55 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML EIF3I Beta-prop_SPT8 Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 Beta-prop_DCAF12 Beta-prop_IFT140_1st Beta-prop_TEP1_C Beta-prop_WDR75_1st ANAPC4_WD40 WD40_RFWD3 MIOS_WD40 WD40_MABP1-WDR62_1st Beta-prop_SCAP NBCH_WD40 Beta-prop_LRRK2 WDR54
Other DBs
NCBI-GeneID: 105345086
NCBI-ProteinID: XP_011451387
LinkDB
Position
6:complement(23106822..23120676)
AA seq 698 aa
MIVKRLHSREYGLSERLDLSNVLESFESLKTDEYIGEDEGAFVPPLACEFCKVKSKGHIL
AVVDENGFIVIYNTKKTGQMAIQDDWQAHNNAIFDMTWMESEEKILTASGDQTVVMWDVE
KQEKLNVFRGHTSSVRCVCAQRGSNAVFATGSRDGHIMIWDDRCQKKDGHISPVNIIRNA
HSITQRSLGHKTANRKLGPPRDSQMSVTAVLFQTDMNLFSAGTLDGCIKEWDLRKNFSIS
NSDAVPKVTITYPGMSKRRLGYSNLVFDSSYSQLFANCRDDVIYQFDVINNSPKPVHSYK
GHESGSFFIKSCVSPDDEYLLTGSTDEMAYIYKIGCPKQSPIVLKGHSMEVSDVKWCPTD
FTKLATLSDDNTMRIWRLHRRPWPADPGEVTGTAERTHKEIGVSADGLEQKLTEKSNHTL
ISSVKATAISESRVSPMMSPSIKTWLSRTSPKTQVSSLQSQKATQSSESMKKDEPSKVSI
FKGNRLPCKRKLIDEDSEDSGSFERFTKRQRVQDSPIKVAELRSPRKLEIKPSPKKLDFS
QSACLQKDKSMNPLSGSPRLPRSPLTSKPCLSAININPESRKSSSLESVSSPTVNLPNLV
KEGSVNKINIFYKKCDKENSPQKLNWLSQIRQQKLASREELSKGSPKRALFEKTSESPRS
RNSQSNSSSQSSSQEEIRSPVPKGMKPLHAYFKKKQEN
NT seq 2097 nt   +upstreamnt  +downstreamnt
atgattgttaaaaggttacacagtcgtgagtatggtctttcagaaaggttggatttgtca
aatgtattggaatcatttgaatcactaaagacagatgagtacattggggaagatgaaggg
gcatttgttcccccacttgcgtgcgagttctgtaaagtcaaatcaaaagggcacatacta
gctgtggtagatgagaatggctttattgtgatttacaacacaaagaaaactggacagatg
gcaattcaggatgactggcaggcacacaacaacgcaatatttgacatgacatggatggag
agcgaggaaaagatactgacggcttccggggaccagacagtggtaatgtgggacgtggag
aaacaggagaaactcaatgtgttccgggggcacacaagctccgtacgatgtgtgtgtgcg
cagaggggaagcaatgccgtgtttgcgactggatccagagatggtcatatcatgatatgg
gatgacagatgccagaaaaaagatgggcatatctctcccgtgaacataattagaaatgct
cattcaattacccagcgctcacttggacataaaactgcaaatagaaagcttggaccacct
cgcgacagccaaatgtctgtgacagctgtgctcttccagaccgatatgaatctcttttct
gctgggactttggatggatgtattaaggaatgggatctaaggaaaaacttttccatttca
aattctgatgcagtgccaaaagtaactatcacatatccaggcatgtctaagagaaggctc
ggttattccaaccttgtatttgattcaagttacagccagctctttgccaactgtagggat
gatgtcatatatcaatttgatgtcatcaacaacagccccaaaccagtgcacagttacaag
ggccatgagagtggttcctttttcatcaagtcgtgtgtcagtccagatgatgagtatctc
ctcactgggtccacagatgaaatggcttacatctacaagattggctgtcctaagcaaagt
cccattgtccttaaaggccacagcatggaagtgtcagatgttaagtggtgtcctacagat
tttacaaagttagccaccctgtctgatgacaacaccatgaggatttggagacttcaccgt
agaccgtggcctgctgaccccggggaagtgacagggactgctgagagaacccacaaagag
atcggtgtatcagctgatggtcttgaacagaagttaacagagaaatctaaccatacgttg
atctctagcgtaaaggcaacagccattagtgaatctcgtgtgtcaccaatgatgtcacct
tccataaagacctggctgtccagaacttctccaaagacccaagtcagttcattacaaagc
cagaaagcaacacagtccagtgaatccatgaaaaaggacgaacccagcaaagtgtccatc
tttaaaggaaatcggctgccctgcaagaggaagttgattgatgaggacagcgaagacagt
gggtcctttgagaggttcacaaagagacagcgtgtacaggacagtcctatcaaggtcgcg
gagttacgtagccccaggaaactggaaatcaaaccgagtccaaaaaaattagacttttcc
caatcagcatgtcttcaaaaggacaaaagtatgaacccgttaagtggcagtccacgatta
cccaggagtccattaacttcaaaaccctgtctgtcagcaataaacattaatccagagtct
cgcaaaagtagttcactggaatctgtgtcatcaccaactgttaacttacctaacctagtg
aaagagggcagtgtcaacaaaatcaacatattctataaaaaatgtgataaagaaaacagt
cctcaaaaactgaactggttgtcccaaattcgtcagcagaaattggcatcccgggaggaa
ctcagcaagggatcgccaaagcgggcactgtttgagaaaacttcggaatcaccaaggtca
agaaactcgcagtctaattcctcatctcagagcagtagtcaggaggaaattaggtcacct
gtgccaaagggaatgaaacctctgcatgcttacttcaagaagaagcaagaaaactaa

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