Magallana gigas (Pacific oyster): 105345410
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Entry
105345410 CDS
T03920
Name
(RefSeq) WD repeat-containing protein 46 isoform X1
KO
K14768
U3 small nucleolar RNA-associated protein 7
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
crg03009
]
105345410
Ribosome biogenesis [BR:
crg03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
105345410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BING4CT
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR3_1st
EIF3I
WD40_WDHD1_1st
WD40
ANAPC4_WD40
Beta-prop_WDR5
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
B-prop_COPA_B_2nd
Beta-prop_Vps41
Beta-prop_EML
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
WD40_RFWD3
MIOS_WD40
Ribosomal_L12
Beta-prop_Aladin
ParBc_2
Motif
Other DBs
NCBI-GeneID:
105345410
NCBI-ProteinID:
XP_011451844
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Position
2:complement(3388219..3399286)
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AA seq
654 aa
AA seq
DB search
MESSENKEKDESTGTKSKESAKPSKKAQKPWRKKFFKEFDRKKTEFQKRAKTRQEKKICE
TQETELTEKSVDNQPETVKNKTDKKQPEKVKKKLRNIVQKSGPNKDLKRLQHGPKQDSKA
NRDERRDPESPSEFRKDRYPGDAPVPKKLMSKYQRGKKLHTKGARTHHGHVKLVQNEKKV
TMAVKQAARSERLLQEQSGFMIPEDGESTTNVTQSDIVQAADITTAQKHFNLELTQFGPY
KAQYTRNGKHLLIAGSKGHVAALDWLTKRLLCEINVMETVRDIRWLHQETMFAVAQKQWT
YIYDNQGIELHCLKQPNEALRLEFLPYHFLLASSNATGYLYWLDVSVGQKVASHNTGLGR
LDVMCQNPQNAVICLGHPTGSVSMWSPNVNEPLVKMLCHGAAVRSVAVDPTGNYMATSGV
DRKMKIWDIRKFEMVHSYQIGCGAGHMVFSQTGALGLGKGNIVEVYQDPCRQQLTSPYMI
HKLKTTVNNLHFCPYEDVLGVGHGDGFTSLIIPGAGEANFDAMESNPYQTKKQRREAEVQ
MLLDKIPVEMIHLDSKMIGKVDMKSFVERVEENNKIHFKKPMSISYEPKHKMKGKGSGRK
KEQRKRGVIEEGRRQTVKELVKDKLQEGAQGRKESSTAVSKSKGVLDRFKKTET
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggagagctctgaaaataaagagaaggatgaaagtactgggactaagtcgaaagaaagc
gcaaaaccctcaaaaaaagctcaaaaaccatggcgaaagaagttttttaaggagtttgat
cgcaaaaaaactgaatttcaaaagagagcaaaaacaagacaagaaaaaaagatatgtgaa
acacaggaaacagaattgactgaaaaaagtgttgataatcaaccagaaacagtgaaaaac
aaaactgataaaaaacaaccagaaaaggtgaaaaagaaactgagaaatatagtgcagaaa
agtggccctaataaagatctgaaaaggcttcagcatggaccaaagcaagacagcaaagct
aacagagatgagaggagagatccagaaagtcccagtgaatttaggaaggacagatatcca
ggagatgcacctgttccaaagaagctgatgtcaaaataccagagagggaaaaagttacac
actaaaggagcacggacacatcatggacatgttaaactggttcagaacgagaagaaggtg
acaatggcggtgaaacaggcagctcgctccgagcgtcttctccaggaacagtcgggattt
atgataccagaggatggagagagtacaaccaatgtcactcagtcggacatcgtccaggcc
gcagacataaccacagctcaaaagcactttaaccttgaattgacccagtttgggccatac
aaggcccagtacaccagaaatggaaaacatttattgatagcagggagtaaaggccatgtc
gcggccttggattggctgaccaagcgtctgctctgtgaaattaatgtcatggagacagtc
agagacatcaggtggttgcaccaggagacaatgtttgctgtggcccagaagcagtggaca
tatatctatgacaaccagggcatagagttgcattgtctgaaacagcccaacgaagcactt
agactcgagttccttccctatcatttcctgctggccagttctaatgcgaccgggtaccta
tactggttagatgtgtcggtcggtcagaaagtggcgagtcacaacactggactagggcgt
ctggacgtcatgtgtcagaacccccagaatgccgtcatttgcctgggacatcccacagga
agtgtttcaatgtggtctccgaatgtgaacgaaccgctggtcaagatgctttgtcacggg
gcggcggtcagatctgtagctgttgaccccacaggaaattacatggccacatctggagtg
gacaggaagatgaagatttgggatatccgtaaatttgagatggtgcactcctatcagatt
gggtgtggagcaggacacatggtgttcagtcagacaggtgccctggggctggggaagggc
aacatcgtggaggtttaccaagacccatgtagacagcagctgacctcaccatatatgatc
cacaaactgaagacaacggtcaacaacctccacttctgtccctatgaggatgtcctgggg
gtagggcatggggacgggttcaccagtctcatcattccaggtgctggagaggcaaatttt
gatgccatggagtctaacccgtaccagacgaagaaacagaggagggaggccgaggttcag
atgttgttggacaagatcccggtggagatgattcatcttgactcgaaaatgattggcaag
gtggacatgaagagttttgttgagagagtggaagaaaacaacaaaatacatttcaaaaag
ccaatgtcaatatcgtacgaaccgaaacacaaaatgaaaggtaagggcagtggcagaaag
aaggagcagaggaagagaggcgtgatagaagaaggacgaagacagacagtgaaggaactg
gtcaaggacaagctccaagagggcgcccagggcaggaaagagtcttccacagcagtctcc
aagtctaaaggcgtcctggacaggttcaagaagacggaaacatga
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