Magallana gigas (Pacific oyster): 105345709 Help Entry 105345709         CDS       T03920                                  Name (RefSeq) THO complex subunit 3   KO K12880   THO complex subunit 3 Organism crg  Magallana gigas (Pacific oyster) Pathway crg03013   Nucleocytoplasmic transport crg03040   Spliceosome Brite KEGG Orthology (KO) [BR:crg00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     105345709   09122 Translation    03013 Nucleocytoplasmic transport     105345709  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:crg03019]     105345709    03041 Spliceosome [BR:crg03041]     105345709 Messenger RNA biogenesis [BR:crg03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      105345709 Spliceosome [BR:crg03041]  Complex C   Other components    EJC/TREX     105345709  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     105345709 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Beta-prop_THOC3 Beta-prop_WDR5 WD40 WD40_CDC20-Fz Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st ANAPC4_WD40 WDR55 Beta-prop_WDR3_2nd EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR19_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_Aladin WD40_Gbeta WD40_MABP1-WDR62_2nd eIF2A Beta-prop_WDR36-Utp21_1st Beta-prop_IFT122_1st Beta-prop_EML Beta-prop_IFT140_1st Beta-prop_Vps41 WD40_RFWD3 RMC1_N Beta-prop_WDR35_TULP_N Beta-prop_HPS5 WD40_MABP1-WDR62_1st Tricorn_2nd WDR90_beta-prop_4th NBCH_WD40 Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_NUP159_NUP214 Beta-prop_ACSF4 B-prop_COPA_B_2nd PD40 Beta-prop_SPT8 Beta-prop_DCAF12 Beta-prop_ELP1_1st Beta-prop_SCAP Beta-prop_WDR41 Peptidase_S9_N PROPPIN Cytochrom_D1 Beta-prop_WDR75_2nd Beta-prop_DCAF4 Beta-prop_NWD2_C DPPIV_N WD40_like WD_LRWD1 Motif Other DBs NCBI-GeneID:  105345709 NCBI-ProteinID:  XP_065924429 LinkDB All DBs Position 8:38640889..38650462 Genome browser AA seq 323 aa AA seqDB search MATYIENMRKHFQQNKRIREHTAHDSKVHSVAWSCDGRRLASGSFDKTVSVFQLDNDRDR MVKDCTFRGHSDSVDQLCWHPKNPDQLVTASGDKTIRIWDARTNRSVATVNTKGENINIC WSPDGSTIAVGNKDDLITFIDVRSHRSKAEEQFKFEVNEISWNNDGDLFFLTSGQGSINI LSYPDLKLQHTLNAHPANCICIEFDPKGKYFATGSADALVSIWDVAELACIRTLSRLEWP VRTLSFSHDGKMLASASEDLIIDIAEVDSGEKVTEITCEAPTFTVAWHPRRPLLAYACDD RDTYDRNRDAGTVKVFGFPSDNS NT seq 972 nt NT seq  +upstreamnt  +downstreamnt atggcgacttacattgaaaacatgcgaaaacattttcagcaaaacaagagaatacgagag cacacggcgcacgactccaaagttcactccgtggcgtggagctgtgacgggcggcgcctg gcctcggggtcctttgacaaaactgttagcgttttccagctagacaatgacagagatcga atggtcaaagattgcacatttcgtggacatagcgacagtgttgaccagctgtgttggcat ccaaagaatccggatcagttggtgacagctagtggagacaagacaatacgaatctgggac gcccggaccaatcgttctgtggccactgtcaatactaaaggtgaaaacataaacatctgc tggtcaccagatggcagcactatagctgtgggcaacaaggacgacctaattacatttatt gatgtcagaagtcacaggtcaaaggccgaggaacagtttaagtttgaggtcaatgagatc tcgtggaacaatgacggggacctgttcttcttgacgagtgggcaaggcagcataaacata ctgagctacccagatttaaaactccagcacaccctgaatgctcaccctgctaactgtatc tgtatcgagtttgaccccaagggaaagtactttgccaccggtagtgcggacgccttggtc agtatttgggatgtagcagagctagcctgtattaggaccctctccaggttagagtggcca gtcagaactctaagcttcagccatgatggcaaaatgttggcctcagcatcagaagatctg attatagacatagcagaggtcgactcaggggagaaagtcacagaaataacgtgcgaggcc ccgacttttacagtcgcctggcatccccgtcgcccccttctggcttacgcctgcgacgat cgtgacacttacgacagaaatcgggatgcagggaccgtgaaagtgtttggattccccagc gataactcatga

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