Magallana gigas (Pacific oyster): 105346252
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Entry
105346252 CDS
T03920
Name
(RefSeq) nuclear pore complex protein Nup107
KO
K14301
nuclear pore complex protein Nup107
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105346252
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crg03019
]
105346252
03036 Chromosome and associated proteins [BR:
crg03036
]
105346252
Messenger RNA biogenesis [BR:
crg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105346252
Chromosome and associated proteins [BR:
crg03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
105346252
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup84_Nup100
Nic96
Motif
Other DBs
NCBI-GeneID:
105346252
NCBI-ProteinID:
XP_011453057
LinkDB
All DBs
Position
8:24055095..24069121
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AA seq
935 aa
AA seq
DB search
MDPRRSFLGDTSTNATDASFSFNGGIRSQFDSREVSSLRGDDKRKHSERRSLNIQKSLQI
LDDSVSSPSLRSRTGGLRRASYAPKSLTPSSKYDTSVQFTPSRTQQFSQNESQIGRHMAS
STMYGQSMLTNMGEEFTEEITTTNVALLLDEDPGISACRGMYRDFLQCMKDRPSETQVFD
LLSDYERVCQEQVVYMYKLVNRAASRSEPKYQKTFNMLHMLEMEKHTWQLINVLFHDRLE
KELQDMQMAVDDISPLTSMKQSEQQAVTKLFDKDSTIRESQLVIDWLEKCAHDVMDNYGD
NVKFFSDRAVAWENTLHKLKKSGGVTYGNERPLVTEMDPDAPFRQKKMLDDLDQEDEGRL
LQYLFICLRAGQIEKAQEVCKSHGQAWRAATLEGWRLYHDPNFEGPNGQIDPVVGNPYRV
VWKSMCWAMASDTKYDVYEKSLYGALSGNLRAMLPVCKSWSDHVWAHYKVLVDIRAETEI
RTMCAVDKSLDIPQEYWDQPSDPESIFNRIEANENVQRESQDFYHVIQKWVILGDVEKLL
DLMAQWIRGQENTLPQHLIRFMAHVVLFLRSTQHRVNEDKCNVILEAYVKYLIEEDHKEL
VSFYVSKLPPAAQVHWYALFLEGITDVDEKQMCLQLAEEVCLDIPQITKTVVENIRNKSG
GGLAAGEGLSLDVTVTEEDKTKIAAIDWLVFDTAQRAEAMKQANAVMRTFIAVQKLTAAR
EVFNKLPVDSIDIIYRNWHLQTGTDELSADDENAIREYLCTKAYLDAMDGFNEWFNKFHH
TKPAEPLAPHAASFTEKVAFEHRLKQYDQELERWQRGLLAQTENTTKLIYNVLLFANGGW
MVDQREDDSDSGRKQQLESLRQLTIPRLCFLLHDILHKTEQYGACLQIADHVASEQFTLY
KVFRQDELQHLLHLLRESSVAVLNQNKDPLGYEIE
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atggatccaagaaggagttttcttggagacacctctacaaatgccacagatgcaagtttc
tctttcaatggggggattagatcgcagtttgacagcagagaggtttcctcattacgaggt
gatgacaaaagaaagcactctgaaagacgaagtcttaatatacaaaaatccttacaaatt
cttgatgacagcgtctcgtcaccgtcccttcggtcaaggacaggaggtctacgacgggca
tcttatgctccaaaatctctcacaccaagctccaaatatgacacctctgtacagtttact
ccatcaaggacacaacagttctcacagaatgagtcacaaattgggagacacatggcaagt
tctacgatgtatgggcagtccatgctaacaaacatgggagaagaatttacagaagaaatc
acaacaacaaatgtagctctgcttctagatgaggacccaggaatatctgcttgtcgcggg
atgtaccgagacttcctgcagtgtatgaaggaccgaccctcagagacccaggtgtttgat
ttgttgtccgactacgagcgggtatgtcaggaacaggtggtctacatgtacaagctcgtc
aacagggccgccagccgcagcgaacccaaataccagaaaacatttaacatgcttcacatg
ctagaaatggagaaacatacatggcagctgataaatgttttgtttcatgatcgcttggag
aaagagttacaggacatgcagatggctgtagatgatattagtcctctgaccagtatgaag
cagagtgaacagcaggcagtgaccaagttgtttgataaagacagcactatcagggagagt
cagttggtgatagactggttagagaaatgtgcccatgacgtgatggataactatggagac
aatgtgaaattcttctcagaccgggctgttgcatgggagaatacacttcacaaactgaag
aagtcaggaggggtgacgtatggaaatgagagacccctggtcactgaaatggacccagat
gccccgttccgtcagaagaaaatgctggatgacctagatcaggaggatgaggggcgactt
ctacagtacctgttcatctgtctgcgagctggacagatagagaaggcccaggaagtgtgc
aagagccacggtcaggcctggagagccgctaccctggaggggtggagactgtaccatgac
ccaaactttgagggacccaatggacagattgaccctgtggtggggaacccgtaccgagtg
gtctggaagagcatgtgttgggccatggcctctgatacaaagtatgatgtgtatgagaag
agcctgtatggtgctctgagtgggaacctgcgggcgatgttacccgtctgtaagtcctgg
tcggaccacgtgtgggcccattacaaggtcctggtggacatccgggcagagacagagatc
aggaccatgtgtgcagtggacaaaagtctggacattcctcaggagtactgggatcaaccg
tctgacccagaatccatctttaatcgcatcgaagccaatgagaatgttcagagagagtct
caagatttctaccatgtgatccagaagtgggtcattctaggtgatgtggaaaaacttcta
gatttgatggcccagtggataagaggacaggaaaacaccttgccgcagcatttaatccgc
ttcatggctcatgttgtactattcctcagaagcacacaacatcgagtgaatgaggataag
tgtaatgtaatattggaggcctatgttaaatatctgatagaggaggaccacaaggaactc
gtctctttctacgtttccaaactaccgcccgccgcgcaggttcactggtacgcactcttc
ctggaaggaatcacagatgtggatgagaagcagatgtgtctccagctggcggaggaggtg
tgtctggatatcccacaaatcaccaagaccgtggtggagaacatccgcaacaagagtggc
ggtgggctggccgcgggggaggggcttagtctggacgtcacggtgacagaggaggacaag
acgaagattgcagccattgattggctggtatttgatacggctcagagggctgaggcaatg
aaacaggccaatgccgtcatgaggactttcattgctgttcagaaattgacagccgccaga
gaagtgttcaacaaactgccagtagattctatagacatcatctacagaaattggcatcta
cagactggaacagatgagctttcagcagatgatgagaatgccattcgagaatacctgtgt
acaaaggcctacctggatgctatggatggtttcaatgaatggttcaacaagttccaccac
acaaagccggcagaaccattagctccccatgccgcatccttcacagagaaggtggcgttc
gagcaccgcctgaagcagtacgaccaggaattggagcggtggcagcgcgggctgctggcc
caaactgagaacacaaccaaactgatatacaatgtcctgttgtttgccaatggaggctgg
atggtggaccagagagaggatgactcggactctggtaggaagcagcagctggaatcatta
cgacagcttacgatcccgcgactgtgcttcctgttacacgacattctgcacaagacggag
cagtacggggcgtgtctacagatcgctgaccacgtggcgtccgagcagttcacactgtat
aaggttttccgccaggacgagttgcagcatctgcttcatctgttgcgagagtcttctgtg
gccgttctgaatcagaacaaagacccactgggctacgaaatagaatga
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