Magallana gigas (Pacific oyster): 105346347
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Entry
105346347 CDS
T03920
Name
(RefSeq) methyl-CpG-binding domain protein 2 isoform X1
KO
K11590
methyl-CpG-binding domain protein 2
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105346347
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
crg03036
]
105346347
Chromosome and associated proteins [BR:
crg03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
105346347
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD_C
MBDa
MBD
DUF7028
Motif
Other DBs
NCBI-GeneID:
105346347
NCBI-ProteinID:
XP_011453189
UniProt:
K1RFC5
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All DBs
Position
6:27150660..27166181
Genome browser
AA seq
248 aa
AA seq
DB search
MEKRRLDCVGLPPGWKREEVVRKSGLSAGKTDVYYISPDGKKIRSKPQLARQLGEQFDLS
AFDFRSGRINHSQLRKSKRPQGPYDFTRGMRHDSSLVLPIRQTASIFKQPVTVIHRQESK
TKSELKHGPQDPPKQLFWEKRLQGIQACDSQEEVIKALDLPRNVQGVGPELTTENILQSI
SAALHISSSPVVGQGNNRATVAKNPGVNIDVYQPHIQQVIVSEDDIRRQEVKVIEARRKL
QDAIKGIM
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaacgcagactggactgtgtcggtctacccccaggctggaaacgcgaagaggtt
gtcagaaaatcgggactttctgccgggaaaactgatgtttattatataagcccagatggt
aaaaagattcgaagcaaaccccagttggctagacagctaggagaacaatttgatctcagt
gcatttgacttccgcagtggtagaattaaccacagtcagctgagaaaaagtaagcgccct
caaggaccctatgacttcaccagaggaatgaggcacgacagtagcttagtattacctata
cgtcagaccgcctccatctttaaacagccagtcactgtgatccacaggcaggagagcaag
acaaagtccgagctcaaacatgggcctcaggatcctcccaaacagttattttgggagaag
cgactacaaggcattcaggcctgtgatagccaagaagaggtaatcaaagcactggaccta
cccagaaatgtacaaggagtagggcctgagctgacaactgagaacatcttacagagtata
tcagcagctctacacatcagcagcagccccgtcgtaggccagggcaacaatcgagcgacg
gtggccaaaaatcccggggtcaacatcgacgtgtatcagccacacatacagcaagtaata
gtgtcagaagatgacattcgtagacaagaagtgaaagtgattgaggccagaagaaagcta
caggatgcgataaagggaattatgtag
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