Magallana gigas (Pacific oyster): 105346475
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Entry
105346475 CDS
T03920
Name
(RefSeq) E3 ubiquitin-protein ligase Hakai isoform X1
KO
K15685
E3 ubiquitin-protein ligase Hakai [EC:
2.3.2.27
]
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crg03019
]
105346475
04131 Membrane trafficking [BR:
crg04131
]
105346475
04121 Ubiquitin system [BR:
crg04121
]
105346475
Enzymes [BR:
crg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105346475
Messenger RNA biogenesis [BR:
crg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
105346475
Membrane trafficking [BR:
crg04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
105346475
Ubiquitin system [BR:
crg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105346475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_Hakai
zf-C3HC4
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
105346475
NCBI-ProteinID:
XP_034305371
LinkDB
All DBs
Position
4:complement(5070453..5076293)
Genome browser
AA seq
504 aa
AA seq
DB search
MADDQAMELESEAGGTVNTGNVKKNIPIKLKTQPKAAKGRPRKAAKPKKEATLPEIPQPV
VDENSGVADPEFIDAPIFKQPGEPLHQSQPLRWNHKVNLIGEKVVDPLIHCCDKCKLPIL
IYGRMIPCKHVFCYDCARKTDKVCARCEENVQRIEQSALGTVFVCSYGGPKHGDGGCRRT
YLSHRDLQAHIYHRHMRTDSAKSSSSSNAGSGGSKSVVEQYTTSKGSSKSQHSTPVIEQY
TTAAGRHATGDSHLNLPHSSRPSDAMFQQSMMSQMPPPSQALPTQTMLQGPPPRLPLSQG
QAPTQTIIPGQQADSYQLSSMSGMAPGRKTNLITVPLQEEPDYRRRDLAGGYSSLTPSTF
STPMPMPGNIAPQQGFPSMHQGPSLTSIGVFPPSGPPPFTSPPLRSQLAVSSGVSVPISH
PPPISVPGPNLSTPPPPLLSGPRMPIQGSQPPRFGSPQGHFNDSYGQSGSGGQNPHGPWN
APPPQRSSGGQSQRAQSDSYQYYQ
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgatcaagctatggaattggaatcagaggctggagggacagtcaatacagga
aatgtcaaaaagaacattcccattaaactaaaaacccagccaaaggcagctaaaggaaga
ccaaggaaagctgctaaaccaaagaaggaagcaacactgccggaaatccctcaaccagta
gtggatgagaacagtggagttgcggaccctgagtttattgatgcccccatcttcaaacag
cccggcgaaccactgcatcagagtcagcctctacgctggaatcacaaggtgaacttgatc
ggagagaaggtagtggatcccctgatacattgctgtgacaagtgtaaactgcccatcctc
atctatggccggatgattccttgcaagcatgtgttctgttatgattgtgcaagaaagaca
gacaaagtatgtgcaaggtgtgaagagaatgtgcagcggatagagcagtctgctctgggt
acggtgtttgtctgtagctacgggggccccaagcatggagacggtgggtgcaggcgcact
tacctgtctcacagggacctacaggctcacatctaccacagacacatgagaacggactcg
gccaagtcttcctccagctcgaacgccggatctggtgggagtaaatctgtagtggaacaa
tacactacatctaaagggagctccaagtcgcagcattccacaccagtcatagagcagtat
acaactgcagcaggaagacatgccaccggggacagccatttaaacctaccacactcctcc
cgcccgagtgatgccatgtttcagcagtctatgatgagtcagatgcctccccctagtcag
gccctgcccactcagaccatgctgcagggccccccacccagactaccattatctcagggc
caggctcccacccagaccatcataccgggacaacaagctgacagctaccagctctcttct
atgtcaggaatggcgcctgggagaaagacgaacctcatcactgttcccctgcaagaggag
cctgattaccggaggagagacctagctggtggatacagctcgcttactccctctacattc
tcaacaccaatgcccatgcctggaaacatcgccccacagcaaggattcccatccatgcat
caaggtccctctctgacgtccattggggttttccccccatcagggcctcctcccttcact
tcccctccattaaggtcacaacttgcagtctcctctggtgtaagtgttcccatttcccac
ccgcccccgattagtgtacctggccctaacctttccacaccaccccctcccctcctatct
ggccctagaatgccaatacaaggcagccagccacctagattcgggagcccccagggacat
tttaatgacagttatggacagagtgggtcaggaggtcagaacccccatgggccatggaac
gctccccctccccagaggagtagtgggggtcagagtcagagagcccagtcagacagctac
cagtattatcagtga
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