Magallana gigas (Pacific oyster): 105346554
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Entry
105346554 CDS
T03920
Name
(RefSeq) F-box/LRR-repeat protein 18
KO
K10284
F-box and leucine-rich repeat protein 18
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crg04121
]
105346554
Ubiquitin system [BR:
crg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
105346554
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_FBXL18
F-box-like
F-box
CSTF1_dimer
Motif
Other DBs
NCBI-GeneID:
105346554
NCBI-ProteinID:
XP_034309880
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Position
10:complement(3025654..3033274)
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AA seq
758 aa
AA seq
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MEETNFDCLPDDLIIRIFKNVSAEDLCTIYNVSKRFRRLAFDRSLVRHSDFEQCYGTTPS
SFTDYIKSNSSMLESLSLNHCYWLTGRCVETAVLKCKNLTQLYLLDIGLSTKQLCKILSS
LQKLEALAFTVASVDEFDNNLNASESAQRTMCNIKHLTIHFKVGITPRTEPSISVQFIQK
KNSFIEHCRELTSLHVMGHPNLGCGLPKLLLQPNVVKVSNLKNLKHLSLNYAIDPAARIF
YYGTLMSVAKLHLKLKTVLNPSANFSSERNMDFWKNFWNSQDDLEYLDLSNISLKNIFPT
IFDPGVVKKNLLYLNISQTDSREVGMNLATLGHVCPNLQSLNLKNSQLVYLHKGALEQVG
APIKQQMTFDIEGFSSLVSMCHQIVHLNLSNIHIHEVSGLQKTFVNALTTLTGLRSLALS
PCCLRLQDCETREPEDSPGCSQSGKKQAASTVMVQYAKKRRISLHTASTSQPSVLPDSED
TDLDPASTLYPRCKTGLESLTEACPRLSHLELISAGLVRPVIHRGSIGLAPRPCVYVPCV
ESYALTDAELSYLGRLSNLQYLQLAGLPGIISGSFLSHIAKQCPQLKQLHLSYLGLTAHC
IYTNQLCQAFQHFTSLIDLRLEHAYLSIDQLFCRSARKCRSLQRFCVVSKNGSLDPDAVT
GLMSELPRLMVLQLFTDSTQTMCKKLMKALKDRFQSTRPALSVTIYPLFDQDTAYVMNKI
PTKHLEELTIFSSKICQQPPGQCRVKAKTRDRSGKVTV
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaacgaattttgattgtcttccagacgacttgatcatcagaatttttaagaat
gtttccgcggaagatctatgtacgatatataacgttagcaagcgcttcaggcggctagcc
tttgacagaagtctcgtgagacattcggattttgagcagtgctatggaaccaccccttcc
tcgttcactgactacatcaaatctaacagctccatgctagaaagcctgagtctgaaccac
tgctactggctgactgggcgctgtgtggagactgctgtgctcaagtgtaaaaacctgacc
cagctctatctgctagacattggtctttcaacaaaacaactttgtaaaattctgtcctca
ctccaaaagctggaggccctcgcctttacggtggccagtgtggatgaatttgacaataat
ctaaatgcctccgagtctgctcagaggactatgtgcaatatcaaacatctgacaattcat
ttcaaagtggggatcactccacggacagagccatcaatatcggtacagttcattcaaaag
aagaactcattcatcgagcactgccgagaactgacctctcttcatgtgatgggacatccc
aacttgggctgtggattgcccaaacttctccttcaaccaaatgttgtcaaagtcagcaac
ctcaaaaacttaaagcatttgtcgctaaattatgccatagatccagcggcaaggatattc
tattatgggaccttaatgtctgtagccaagctacatctcaagttaaaaacagtccttaat
ccttctgcaaattttagttctgaaaggaacatggacttctggaaaaacttctggaattct
caggatgatttggagtatctagacttatccaatatatcactgaagaacatatttccaact
atttttgatccaggtgttgttaaaaagaatctgttatatttaaatatatctcaaacagac
agtagagaagtggggatgaatctagccactctgggccatgtttgtccaaaccttcaaagc
ttaaatctgaaaaacagtcagctagtgtatctacataagggggcattagagcaggttgga
gcaccaataaagcagcagatgacctttgacattgagggtttcagcagcttggtcagcatg
tgccatcaaattgtccatcttaacctcagcaacattcatatccacgaggtcagcgggcta
cagaagacgtttgttaacgccctcaccacactaacagggttacgctctctagctctgtcg
ccatgttgcctacgattacaggactgcgagaccagggagcccgaggacagtccggggtgt
tcacagtccgggaagaagcaggccgcctccacggtgatggtccagtacgccaaaaagagg
cggatatctctccacactgcatccacctcccagccatcggtcttgcctgactctgaggac
actgaccttgacccagcctccaccctgtaccctcggtgtaagacgggccttgagtcgctg
accgaggcctgcccccgcctctcccacctagaactgatcagtgctggactggtcaggcct
gtgatacacagagggtccatcggactggcaccacggccctgtgtctatgtcccatgtgtg
gagtcgtatgccctaacagatgcagagttgtcatacctgggacgactctctaatctccag
tacctacagctagctggattaccaggcattataagtggatcgtttctgtcacacattgct
aagcagtgtcctcagctgaaacagctccacctgtcgtacctaggcctgaccgcccactgt
atctacaccaaccagctctgtcaggccttccagcactttacctccctcatcgatctcagg
ttagagcacgcctacttgtccatcgatcagctgttttgtcggtcagccaggaagtgtagg
tctctgcagcggttctgtgtggtgtccaagaacggtagtctggaccctgacgcggtgaca
ggcctgatgtctgagcttcctcgtctgatggtactacagctgttcactgattcaactcaa
accatgtgtaaaaaactgatgaaggccctgaaagacaggttccagagtacccggccagca
cttagtgtgaccatctaccctctgtttgaccaggatacagcgtacgtcatgaacaaaatc
cccaccaaacacctggaggaactgaccatattcagctccaagatctgtcaacagcctcca
ggacagtgtagggtcaaggccaaaaccagagaccgctcaggcaaggtcactgtatga
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