Magallana gigas (Pacific oyster): 105346607
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Entry
105346607 CDS
T03920
Name
(RefSeq) E3 ubiquitin-protein ligase RING2-A
KO
K10695
E3 ubiquitin-protein ligase RNF1/2 [EC:
2.3.2.27
]
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
105346607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crg04121
]
105346607
03036 Chromosome and associated proteins [BR:
crg03036
]
105346607
Enzymes [BR:
crg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105346607
Ubiquitin system [BR:
crg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105346607
Chromosome and associated proteins [BR:
crg03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
105346607
Noncanonical PRC1 (PRC1.1)
105346607
Noncanonical PRC1 (PRC1.3/1.5)
105346607
Noncanonical PRC1 (PRC1.6)
105346607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-Nse
zf-C3HC4_4
zf-RING_5
RING_XB3-XBAT31
zf-RING_4
zf-rbx1
zf-RING_6
zf-UDP
TRAF3_RING
Arch_flagellin
zf-C3HC4_5
SBP
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
105346607
NCBI-ProteinID:
XP_011453568
UniProt:
K1QC18
LinkDB
All DBs
Position
3:complement(10062664..10065839)
Genome browser
AA seq
332 aa
AA seq
DB search
MANEVVNAPNKTWELSLYELHRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKNTMTT
KECLHRFCQDCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAHQ
ARVLAKLNKQHSTSALTSSIEEGLRVQALSRPQRVRKHATEPDLSRLETASNASSENTPL
KRPKTLSDDSSAENSLAEAVTDSAPPPELPQPVGDIELIFRPLPADHEPPDDSQIRYIKT
TANATVDHLSKYLAIRLSLESKKVDAGTSSSGGENKYTIYIASNPGNYTALNGAMTLEQV
NEKYWRINKPLEMFYAVQKKAESPKKSEKLEK
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgaagtcgtaaatgcaccgaataaaacatgggaattaagtttgtatgagctt
cacagaactcctcaagaagcaataacagacaatacagaaatagcagtgtcacctagaagc
ttacacagtgaattgatgtgtccaatatgtcttgacatgctaaaaaatactatgacgaca
aaggagtgcttgcaccgcttttgtcaggactgcataataactgcacttcgaagcggtaac
aaagaatgtcctacgtgcaggaagaaactcgtgtcaaagagatcccttcggccagatccc
aattttgatgcgttgatttctaagatatatcccagtcgagacgaatatgaagctcatcag
gctagagttcttgcaaaactaaataaacaacacagcacatctgcactaaccagcagcatt
gaagaaggattaagagtacaagccttgagcagaccacagagggtccgcaaacatgccaca
gaaccagacttatcccgcctggaaacagcaagtaatgcttccagtgaaaatactccccta
aagagaccaaagactttgtctgatgactctagtgctgagaactcgctagcagaggcggtc
actgactctgccccacccccagagcttccccagccagtgggagacattgaattaatattc
agacctctcccagcagaccacgagcctccagatgactcccagattcgatatattaaaaca
acagctaatgcaacagtggaccatttatcaaagtaccttgcaataagattgtcattagaa
tccaaaaaagttgatgcaggtacaagttcatctggaggggaaaataaatacacaatttac
attgcaagtaaccctggaaactacacagctctcaatggtgctatgactctggaacaggtc
aatgaaaaatactggcgtatcaacaaacctttggaaatgttttatgcagttcagaaaaaa
gcagagtcaccaaagaaatcagaaaaattggaaaaataa
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integrated database retrieval system
