Magallana gigas (Pacific oyster): 105346722
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Entry
105346722 CDS
T03920
Name
(RefSeq) uncharacterized protein
KO
K10275
F-box and leucine-rich repeat protein 9
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crg04121
]
105346722
Ubiquitin system [BR:
crg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
105346722
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
F-box-like
LRR_At1g61320_AtMIF1
F-box
LRR_At5g56370
F-box_5
Motif
Other DBs
NCBI-GeneID:
105346722
NCBI-ProteinID:
XP_011453734
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Position
3:29830452..29835481
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AA seq
629 aa
AA seq
DB search
MAGSLPQEVVTHILRFLNVSDRKEAALVCKTWYEASLDPILQKDVMLHFNGDTQYVPLSS
ISHRRLSHLTLSQLDNSMNTKHVLLRSCKQLSDSLRSLSFKSCNITESTFVEILSSCINL
TSIDLTNCNSIFLSGRLLERNTDLQLLRDTLKNVKELNLSSVRQLSDVTFNRIVTICHNV
EKIWLVGSHIVFSSDHYIPRAKSKLVSSAVLTFENFIDFVGLQASTLTTIDLSRNQINDY
ALETLANVPNLHLQELRLVACKEIEDKGIVALSHKQKSLKILDIRDCHGVADPGIGAIAA
NLTQLQSLALNRCRNVTAHSIRKLSYLSQLQTIEMSDLYQVTSFGIEAGLCANASMPLTH
VNLSCCSLITDGLLEKLCSIHPFIVHLDLGSCTSLTNHSIFEITKNLKNIQFLRLAWCKK
ITDLGVLGFELNIDEQKPLEEGCNKNYESTTIFRKPTLKEEKMKVQKMKEEIIEKELLRY
KLCNLSKLRDLDLSVCLGLTDIGLVQVLKFQELRYLNLDMIPITDTTVLALSAANPSLEH
LVLSKCASITDDAVEAIARRLPRLNNLNLSSCDNLTDKSIRFLQMYSKRLRTLDVSFCRN
ISPEAIDDLERSCKSLQSVNRRLTGGKTY
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggctgggtcgcttccacaagaggttgtaacgcatatactgcgtttcctgaatgtatct
gaccgcaaggaggctgcccttgtgtgcaagacttggtacgaagcctccctggaccccatt
ctgcaaaaggatgtcatgctgcactttaacggggacacccagtacgtccctttgtcgtcc
atcagccaccggcgcttatcacacctgacgctcagtcagctcgacaattccatgaacacc
aagcacgtcctactgaggtcatgtaaacaactgagcgacagtctgaggtcgctttcgttt
aaatcttgcaacattaccgagagcaccttcgtagagattctctccagctgtatcaatctt
accagcattgaccttacgaactgcaacagtatatttttgtctgggcggcttttggagaga
aacacagaccttcagcttttgagagatactctgaaaaacgtgaaagaattgaatttatca
tcagtacgtcagctttctgacgtcacatttaacagaatcgtgacaatctgtcataacgtg
gagaagatttggttagttgggtcccacattgtgtttagcagtgaccattacattccaaga
gctaaatccaaactcgttagcagcgcagtgctaacttttgaaaattttattgatttcgta
ggtttacaggcgtcgactttaactacaatagatttaagtcgaaaccaaatcaacgattac
gctttggaaactcttgcaaatgttccaaatcttcatttgcaagagttgcgtttggtggct
tgcaaagagatagaagataaaggaattgttgctttgagccacaagcaaaaatctcttaaa
attcttgacatcagggactgccatggtgttgctgaccctgggattggtgccatagcagca
aatctgacccagctccaaagccttgctttgaaccggtgtcgcaatgtcaccgctcactcc
attcggaagctctcgtatctatcacaactgcagaccattgaaatgtccgacttgtatcag
gtgacctcattcggtatagaggctggactgtgcgcaaacgccagtatgcctttgactcat
gttaatttgagttgttgctccttgattacggacggacttctggaaaagctttgctccata
catccatttattgtgcatttggacctgggttcttgcacaagtctcacaaatcacagtatt
tttgaaattaccaaaaatctaaagaatattcaatttctacgtcttgcttggtgcaagaag
attacggacctgggggttcttggatttgagctaaacattgatgaacagaagcctttagag
gaaggttgtaacaaaaattacgaaagcacaaccatatttcgcaaaccaactttaaaagaa
gagaaaatgaaagtgcaaaagatgaaagaagaaatcatagaaaaggaacttcttagatac
aaactatgcaacctctcaaagttgcgtgatcttgatttatcggtttgtcttggactgact
gacattgggttagttcaagtattgaaattccaggagcttcgttacttgaatctagacatg
attcccattactgataccacagtgcttgctctgtcggccgccaatccaagtcttgaacac
ctcgtgctatcgaaatgtgcgtctatcacagacgatgcggtcgaggccattgcgaggcga
ctcccgcgcttgaacaacttgaacctttccagttgtgacaacctgaccgacaagagcatc
cggtttctgcagatgtacagcaaacggcttcggaccctggacgtatcgttttgccgtaat
atttccccggaagcgatagatgatttggagagatcctgcaaatccctacagagtgttaac
cgcagattgacaggcggcaaaacgtactga
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