Magallana gigas (Pacific oyster): 105346726
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Entry
105346726 CDS
T03920
Name
(RefSeq) integrin beta-3 isoform X1
KO
K06493
integrin beta 3
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03266
Virion - Herpesvirus
crg04081
Hormone signaling
crg04145
Phagosome
crg04148
Efferocytosis
crg04512
ECM-receptor interaction
crg04517
IgSF CAM signaling
crg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
105346726
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
105346726
04512 ECM-receptor interaction
105346726
04517 IgSF CAM signaling
105346726
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
105346726
04148 Efferocytosis
105346726
09142 Cell motility
04820 Cytoskeleton in muscle cells
105346726
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crg04131
]
105346726
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
crg04147
]
105346726
04515 Cell adhesion molecules [BR:
crg04515
]
105346726
04090 CD molecules [BR:
crg04090
]
105346726
Membrane trafficking [BR:
crg04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
105346726
Exosome [BR:
crg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
105346726
Cell adhesion molecules [BR:
crg04515
]
Integrins
Integrin beta subunits
105346726
CD molecules [BR:
crg04090
]
Proteins
105346726
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
EGF_Teneurin
Integrin_b_cyt
EGF_TEN
I-EGF_1
EGF_2
DUF7949
PFK
Motif
Other DBs
NCBI-GeneID:
105346726
NCBI-ProteinID:
XP_011453738
LinkDB
All DBs
Position
3:complement(29879331..29894005)
Genome browser
AA seq
779 aa
AA seq
DB search
MALLGVYCQMVIITLFISIPGLVFCQSCNGFRCGKCLIRSGCAWCKDPDYKLNRCDSLEK
MIGDGCTNIVKREPSRITVTQNDDFSDGGPGLEAVQIRPQRVKIQLTPNDAEVRLPIYYK
IARNFPLDVYFLNDPSYTMRFLIQRLNELANSIADDISLLTTDFRFGLGTSMEKNILPFT
DPKGLMYSCNNCDPPYSFIHRLSLTRDVEDFKVALSKVNTTGNFDFPEGLLDGLMQVMVC
GDRIGWRNKARKMVIYASDIQFHQAGDGRLAGILEPNDCMCHMDSTGKYSKAEIQDYPSV
GQIIQKARENNINILFVIGGDESERVRTTVYNSLAAALPGGIDFAAELDTTSSNIIQIIG
DSYRRLRDTVKMVSSLLPKEIMLKIYSDCNSDGRFNLTNLCTVLNFNQTLTFDASIQSNL
NTCPEERNSSFAIFPEGLDERVTVDLEHACGCDCQMEPEAEPKSSKCNGRGRYECGICIC
DPGWAGERCDCDERGSVAEACGTEQGICSGVGNCTCGKCECSPGFDGEKCECSDRNCRSY
NGLLCGGPTNGNCDCGKCACYSNFTGETCECSTSTGMCMTENNTLCSENGICECGECICS
AGFTGNHCERCKNCPAICEIQYNCVECAGFNQGLYNQSICDQRCKNVEIVSLLQEASFSK
DLTITGCVLRDRFGCIIKFNVHDSENEQIIKIKSLRECPPSPPDPLIIGASVSGAVVLIV
LLCILIWKLLTMFYDNMEYSKFEHDLKNPAWETTENPIYKECITSFENPLREANVEESS
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcctcggcgtttattgtcaaatggtcatcataactttatttatatccattcct
ggtttggttttctgccagtcttgcaatggttttcggtgtggtaaatgtctgattcgttcc
ggctgtgcttggtgcaaggatccggactacaaactaaaccgatgcgacagtctggagaag
atgattggagatggatgcaccaacatagtgaagagagagccatctcgcatcaccgttaca
cagaatgacgatttctctgatgggggaccgggattggaggctgttcagataaggccacag
agggtgaaaatacagctgacacctaacgatgccgaagttaggcttccaatctattataaa
attgctcgtaattttccactggatgtgtactttttaaacgacccctcctacacaatgagg
tttctaattcaacgtctcaacgagcttgccaacagtattgctgatgacatttcattgcta
actactgacttccggtttggtcttggtacttccatggagaaaaacattttgccatttact
gacccaaagggcctgatgtactcttgtaacaattgcgatccaccttattcctttattcac
cgcctatcccttactagggatgttgaagatttcaaggttgccttaagtaaagttaataca
acgggaaactttgacttccctgagggtttgctggacggattaatgcaagtcatggtctgt
ggggataggattggttggagaaacaaagccagaaaaatggtgatttatgcctcggatatt
caattccaccaggcaggggatggaaggttggctgggattttagaacccaatgattgcatg
tgtcatatggatagcactggaaagtactccaaagcagagattcaggactatccgtcagtt
ggacaaattatacagaaagcacgggagaacaacataaatatcctgtttgttattggtggt
gatgagtctgaacgtgttcgaaccaccgtctacaacagtttggccgccgctttaccggga
gggattgactttgcggcggaattagacaccacatcttctaacatcatccaaatcatcggc
gatagttataggagattacgagatacggtgaagatggtttcaagtcttcttccgaaggaa
atcatgcttaaaatttattcagattgcaactctgatgggcgctttaacctgacaaatttg
tgcacggtcttgaattttaatcaaacacttacttttgacgcttccattcaatctaaccta
aatacatgccccgaggagagaaacagttcctttgcgatatttccagaggggttggatgag
cgggtcactgtagacctggaacatgcgtgtggctgtgattgtcaaatggaaccggaagcg
gaacctaaaagttcgaagtgtaatgggagaggacgatacgagtgtgggatctgcatctgt
gaccctgggtgggccggagagaggtgtgactgtgacgagagggggtccgtggcagaggcg
tgtggtacagaacaaggaatctgcagcggtgtcggaaactgcacgtgtggaaaatgtgaa
tgttctccgggtttcgacggagaaaagtgtgaatgtagtgaccggaactgtcgctcttac
aatggtttgttatgtggtggaccaactaatggcaattgtgactgtggaaaatgcgcttgt
tattcgaattttaccggggagacttgcgaatgttcgacatccacgggcatgtgtatgacc
gaaaataatactctttgctcagaaaatggcatttgtgaatgtggagaatgtatttgcagc
gcaggatttacaggaaaccattgcgagcgatgcaagaactgtcctgcaatctgtgaaatt
cagtacaattgtgttgaatgcgctggatttaaccagggactttacaatcagagcatatgt
gatcaaagatgtaagaatgttgagatcgtttctctcttacaggaagcatcatttagtaaa
gacctgaccataacgggttgtgtcctacgagacagatttggatgcatcatcaagttcaat
gtccacgattctgaaaatgaacagatcataaaaatcaaatcattgagagagtgtccccca
agcccgcccgacccgctgattattggggccagtgtgtcaggggctgtcgtgctgatagtc
ctcctgtgtattctcatctggaaactccttaccatgttttatgataatatggaatattca
aagttcgaacacgatttgaagaacccggcttgggaaacgactgaaaatccaatctacaaa
gaatgtataacgagtttcgaaaaccccctgcgtgaagccaatgttgaagaaagcagttaa
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