KEGG   Magallana gigas (Pacific oyster): 105346726
Entry
105346726         CDS       T03920                                 
Name
(RefSeq) integrin beta-3 isoform X1
  KO
K06493  integrin beta 3
Organism
crg  Magallana gigas (Pacific oyster)
Pathway
crg03266  Virion - Herpesvirus
crg04081  Hormone signaling
crg04145  Phagosome
crg04148  Efferocytosis
crg04512  ECM-receptor interaction
crg04517  IgSF CAM signaling
crg04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:crg00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03266 Virion - Herpesvirus
    105346726
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04081 Hormone signaling
    105346726
   04512 ECM-receptor interaction
    105346726
   04517 IgSF CAM signaling
    105346726
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    105346726
   04148 Efferocytosis
    105346726
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    105346726
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:crg04131]
    105346726
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:crg04147]
    105346726
   04515 Cell adhesion molecules [BR:crg04515]
    105346726
   04090 CD molecules [BR:crg04090]
    105346726
Membrane trafficking [BR:crg04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    105346726
Exosome [BR:crg04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   105346726
Cell adhesion molecules [BR:crg04515]
 Integrins
  Integrin beta subunits
   105346726
CD molecules [BR:crg04090]
 Proteins
  105346726
SSDB
Motif
Pfam: Integrin_beta EGF_Teneurin Integrin_b_cyt EGF_TEN I-EGF_1 EGF_2 DUF7949 PFK
Other DBs
NCBI-GeneID: 105346726
NCBI-ProteinID: XP_011453738
LinkDB
Position
3:complement(29879331..29894005)
AA seq 779 aa
MALLGVYCQMVIITLFISIPGLVFCQSCNGFRCGKCLIRSGCAWCKDPDYKLNRCDSLEK
MIGDGCTNIVKREPSRITVTQNDDFSDGGPGLEAVQIRPQRVKIQLTPNDAEVRLPIYYK
IARNFPLDVYFLNDPSYTMRFLIQRLNELANSIADDISLLTTDFRFGLGTSMEKNILPFT
DPKGLMYSCNNCDPPYSFIHRLSLTRDVEDFKVALSKVNTTGNFDFPEGLLDGLMQVMVC
GDRIGWRNKARKMVIYASDIQFHQAGDGRLAGILEPNDCMCHMDSTGKYSKAEIQDYPSV
GQIIQKARENNINILFVIGGDESERVRTTVYNSLAAALPGGIDFAAELDTTSSNIIQIIG
DSYRRLRDTVKMVSSLLPKEIMLKIYSDCNSDGRFNLTNLCTVLNFNQTLTFDASIQSNL
NTCPEERNSSFAIFPEGLDERVTVDLEHACGCDCQMEPEAEPKSSKCNGRGRYECGICIC
DPGWAGERCDCDERGSVAEACGTEQGICSGVGNCTCGKCECSPGFDGEKCECSDRNCRSY
NGLLCGGPTNGNCDCGKCACYSNFTGETCECSTSTGMCMTENNTLCSENGICECGECICS
AGFTGNHCERCKNCPAICEIQYNCVECAGFNQGLYNQSICDQRCKNVEIVSLLQEASFSK
DLTITGCVLRDRFGCIIKFNVHDSENEQIIKIKSLRECPPSPPDPLIIGASVSGAVVLIV
LLCILIWKLLTMFYDNMEYSKFEHDLKNPAWETTENPIYKECITSFENPLREANVEESS
NT seq 2340 nt   +upstreamnt  +downstreamnt
atggcgctcctcggcgtttattgtcaaatggtcatcataactttatttatatccattcct
ggtttggttttctgccagtcttgcaatggttttcggtgtggtaaatgtctgattcgttcc
ggctgtgcttggtgcaaggatccggactacaaactaaaccgatgcgacagtctggagaag
atgattggagatggatgcaccaacatagtgaagagagagccatctcgcatcaccgttaca
cagaatgacgatttctctgatgggggaccgggattggaggctgttcagataaggccacag
agggtgaaaatacagctgacacctaacgatgccgaagttaggcttccaatctattataaa
attgctcgtaattttccactggatgtgtactttttaaacgacccctcctacacaatgagg
tttctaattcaacgtctcaacgagcttgccaacagtattgctgatgacatttcattgcta
actactgacttccggtttggtcttggtacttccatggagaaaaacattttgccatttact
gacccaaagggcctgatgtactcttgtaacaattgcgatccaccttattcctttattcac
cgcctatcccttactagggatgttgaagatttcaaggttgccttaagtaaagttaataca
acgggaaactttgacttccctgagggtttgctggacggattaatgcaagtcatggtctgt
ggggataggattggttggagaaacaaagccagaaaaatggtgatttatgcctcggatatt
caattccaccaggcaggggatggaaggttggctgggattttagaacccaatgattgcatg
tgtcatatggatagcactggaaagtactccaaagcagagattcaggactatccgtcagtt
ggacaaattatacagaaagcacgggagaacaacataaatatcctgtttgttattggtggt
gatgagtctgaacgtgttcgaaccaccgtctacaacagtttggccgccgctttaccggga
gggattgactttgcggcggaattagacaccacatcttctaacatcatccaaatcatcggc
gatagttataggagattacgagatacggtgaagatggtttcaagtcttcttccgaaggaa
atcatgcttaaaatttattcagattgcaactctgatgggcgctttaacctgacaaatttg
tgcacggtcttgaattttaatcaaacacttacttttgacgcttccattcaatctaaccta
aatacatgccccgaggagagaaacagttcctttgcgatatttccagaggggttggatgag
cgggtcactgtagacctggaacatgcgtgtggctgtgattgtcaaatggaaccggaagcg
gaacctaaaagttcgaagtgtaatgggagaggacgatacgagtgtgggatctgcatctgt
gaccctgggtgggccggagagaggtgtgactgtgacgagagggggtccgtggcagaggcg
tgtggtacagaacaaggaatctgcagcggtgtcggaaactgcacgtgtggaaaatgtgaa
tgttctccgggtttcgacggagaaaagtgtgaatgtagtgaccggaactgtcgctcttac
aatggtttgttatgtggtggaccaactaatggcaattgtgactgtggaaaatgcgcttgt
tattcgaattttaccggggagacttgcgaatgttcgacatccacgggcatgtgtatgacc
gaaaataatactctttgctcagaaaatggcatttgtgaatgtggagaatgtatttgcagc
gcaggatttacaggaaaccattgcgagcgatgcaagaactgtcctgcaatctgtgaaatt
cagtacaattgtgttgaatgcgctggatttaaccagggactttacaatcagagcatatgt
gatcaaagatgtaagaatgttgagatcgtttctctcttacaggaagcatcatttagtaaa
gacctgaccataacgggttgtgtcctacgagacagatttggatgcatcatcaagttcaat
gtccacgattctgaaaatgaacagatcataaaaatcaaatcattgagagagtgtccccca
agcccgcccgacccgctgattattggggccagtgtgtcaggggctgtcgtgctgatagtc
ctcctgtgtattctcatctggaaactccttaccatgttttatgataatatggaatattca
aagttcgaacacgatttgaagaacccggcttgggaaacgactgaaaatccaatctacaaa
gaatgtataacgagtttcgaaaaccccctgcgtgaagccaatgttgaagaaagcagttaa

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