Magallana gigas (Pacific oyster): 105346769
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Entry
105346769 CDS
T03920
Name
(RefSeq) survival motor neuron protein 1
KO
K13129
survival motor neuron protein
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
crg03041
]
105346769
Spliceosome [BR:
crg03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
105346769
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Gene cluster
GFIT
Motif
Pfam:
SMN_Tudor
SMN_YG-box
SMN_G2-BD
TUDOR
DUF1764
Motif
Other DBs
NCBI-GeneID:
105346769
NCBI-ProteinID:
XP_011453778
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Position
6:26079313..26084432
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AA seq
282 aa
AA seq
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MYFGSISNMAASGTLLFQRGGHGSDSENDLWDDTALIKAYDNAISLVKAQIKKDQGLTDE
EKPETTDKKRKSGKRKKRHRKKKQWKQGDQCRAVFSEDGLVYDAEILSVDLQAGTCVVRY
RGYGNEEEQILDNLKHAPGRRSRPQKLSDPEGGSLADSMDWCGQRSDTSSHPAGSTHNRH
TPNQRGGFSWPGGPPMQGFPSQFSFPGVPSFPNFTGPLPHSRSIPFVPPPPPPIEDGIDG
DNEAMCSMLMAWYMSGYHTGYYQGLKQGRQQGGTSPHPDSFR
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgtatttcggtagtatctctaatatggctgcctctggtacattgctttttcaacgcgga
gggcatggaagtgacagtgaaaatgatctctgggatgatacagctctgataaaggcatat
gacaatgcaatcagtctagtcaaggctcaaattaaaaaagatcagggattaacagatgaa
gagaaaccagaaactactgataaaaaacgtaagagtggaaagaggaaaaaaaggcatcgg
aaaaagaaacagtggaagcaaggggaccaatgtcgagcggttttctctgaggacggtttg
gtgtatgatgcagagatactttctgtggatctgcaggcaggaacgtgtgttgtgaggtat
cggggctatgggaatgaagaggagcagatactggataacttaaaacatgcccctggtcga
agatcccgtccacagaaactgtctgatccagagggaggaagtttggcagacagcatggac
tggtgtggtcaaaggtcagacacttccagccaccctgcagggtccactcacaacaggcac
acacctaaccagaggggagggttttcctggcctggtgggcctccaatgcaaggatttccg
tcacagttttcattccctggagtgccatcatttcctaattttactggtccattaccacat
tcaaggagtatcccctttgtgccaccaccgccacctccaatagaagatggtatagatggt
gacaatgaggccatgtgttctatgttgatggcctggtacatgagtgggtaccacacggga
tactatcagggattaaaacaaggaagacagcaaggagggacatcaccccacccagattca
ttcagataa
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