Magallana gigas (Pacific oyster): 105346809
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Entry
105346809 CDS
T03920
Name
(RefSeq) uracil-DNA glycosylase isoform X1
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
105346809
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
crg03400
]
105346809
Enzymes [BR:
crg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
105346809
DNA repair and recombination proteins [BR:
crg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
105346809
Prokaryotic type
105346809
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Colicin_im
Motif
Other DBs
NCBI-GeneID:
105346809
NCBI-ProteinID:
XP_065930138
LinkDB
All DBs
Position
10:complement(3034316..3039978)
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AA seq
288 aa
AA seq
DB search
MSGRKRKHPTKDDSVGTAKRQNVGKQKPKQKAKKSINTKGKQKGKQTATKNVAGTSGTFS
FSLPDLITNDGWREVLSEELEKDYVKELEKKLTQHYQGGDSVYPPTDLIFNALNMTPLDK
IKVVILGQDPYHDDGQAMGLSFSVPGDMKVPPSLKNIYKELNADPDIDGFITPDHGCLEK
WAKNGVLLLNATLTVTAHQPNSHSKYGWQSLTDAIIRLVSETQQGVVFILWGGFAHKKEK
LIDQKKNAVIKTAHPSPLSFGKFINCRCFSNANGELKKFKKSPVDWTL
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggccgaaaacgtaaacatcctacgaaagacgacagtgttggtaccgccaaacga
caaaatgttgggaaacagaaaccgaaacagaaagccaagaagagcattaacacaaaggga
aaacaaaagggaaaacaaacagctaccaagaacgtagctgggaccagtggcacattctca
ttcagtttaccagacctcatcacaaatgacggatggagagaggtgttgtctgaggagctg
gaaaaggattacgtcaaggaactagagaagaagctgacccagcactatcagggaggggac
agtgtgtacccacccacggacctcatattcaacgccctcaatatgacaccactggacaaa
atcaaagttgtgatcctgggtcaagatccttatcacgatgacggacaggcaatgggactt
tctttctcagttcccggagacatgaaggtaccaccatctttgaagaatatttacaaagag
ctcaatgcggatcctgatatagacggatttataacccctgatcatggctgcttggaaaaa
tgggcaaagaatggggtcttactgttgaatgctacactgactgtgacagctcatcaacca
aattctcactctaagtatggctggcagagtctcactgatgccatcattcgcctggtcagc
gaaacacagcagggagtggtctttattttatggggaggcttcgcccacaagaaggagaaa
ctgatagatcagaagaaaaatgcggtcataaaaaccgcccacccatccccgctgtccttt
ggaaagttcatcaactgcagatgtttctcaaatgccaacggggagttaaagaaattcaag
aaaagtccagttgattggacactttga
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integrated database retrieval system
