Magallana gigas (Pacific oyster): 105346930
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Entry
105346930 CDS
T03920
Name
(RefSeq) exportin-5
KO
K14289
exportin-5
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105346930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
crg03016
]
105346930
03036 Chromosome and associated proteins [BR:
crg03036
]
105346930
Transfer RNA biogenesis [BR:
crg03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
105346930
Chromosome and associated proteins [BR:
crg03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
105346930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
IBN_N
Vac14_Fab1_bd
INTS7_N
Motif
Other DBs
NCBI-GeneID:
105346930
NCBI-ProteinID:
XP_065943324
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All DBs
Position
6:19914173..19930574
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AA seq
1188 aa
AA seq
DB search
MDPQISSLANELSNSIETILNPSSSQNDRQIAHKICEEFKDSSPFCVPVGLVLADKSYKP
VVRHFGLQLLEHAIKFRWIDMKTEEKEYLKTNALQFMANGTLGILEEEFHIKDAVARITV
ELAKREWPQLWPSLQEDLFKLCQMGETQTELVLKVYLRLVEDAVLLQTIPHQRRREIMLG
LTANMKDLFEMFVQFLRLHTNLADENLTSDPQKSKAHLRVSEAVLYTLAGYLDWVSMNLI
FTNNSVLLQMLCLLLGNSSLQLLAAECLLTIVGRKGKVEERKPLLVLFSDEAMKIILSTA
AAAEKSSAHDEYYYLFLKKLCLVLTDLGKQVCALWGVVPDCEQPPNFAMYLEALMAFTQH
PSQILSSYTQSVWQAFMRHEFISKDPILLSFIPKLFETSTKILLKVGFPSKDNSPSCDYS
RQDFDSDEDFSAFFSRYRAEVADMVRQAVLLQPELAFNFAKQWLETTICKPIDTGTEDGV
MCNLSSPSFLEWDAMTLFIESVMSRIAMTDYSPDPNMGVALLKSALAYQSQDPLILSSLL
SCLSALVVFLRNSTETIPAVLEKIFSGVTFAFPGQNKSNRSRSVKNVRQHACSMLVTICK
TQTDLIFPVFDELYQYIKNISSDVEQLSQMEKCILIEALILVCNRFNNYEKQSSFLEEIL
QPAKELWLSEQFRQAFSGSDKWMSYIGLDQAPREPSSEDTCGINRSHIAYCINMMMAVLK
RSKWPEDPQVAENGGFVLMKRDDGSVILKNPATVHVSRMLENLLLFMKSMNGSWHPAMLQ
RRHPELEKSFDLVENEKYAILGIPMPCVDNTSSPVCKNPVTRIQNFLTTMHDYGCHILGN
AGQCLGYEFYAIPNLPQSILSTVFTNLDYLPDYRIKPFIRVILKPFIVNCPKDLYSVAVI
PLLEFVCPYFYQKLNSKWQLINQRLSEDGVEDNMEAQEILEDQLVRQLTREYIDFLGIIF
HKLKQDPVPDDVKMDDAENIPVTQKEEAMTDLGQLCMRCESVYPSVMMCVFGALSWRDTI
ACNKSVPLCWSTVRQLVSTGHMTLDIASNFLCNVIYGLQMHGQHEGPLALLLGLITQMYE
LLRPAFPDLSNVLLQVPNCTTSDIKDLDAKVLQTASQKQIMNDKKRREAFKKILSDVIGK
NLGQQFKKESQYKDLPPIFRIRPPKSTSVLEQREGASGLCELFNPTDD
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atggatccgcaaatttcttctttagcaaacgaactttcaaattcaatagagacaattctt
aacccctctagttcacagaatgatagacaaatagcccacaagatctgtgaagagtttaag
gattcttctcccttctgtgtccccgttggtcttgttttggctgacaaatcttataaaccc
gtggtacgacattttgggttgcagttgctggaacatgccattaaattcagatggattgac
atgaaaacagaggagaaggaatatttgaagacaaatgccctacagtttatggccaatggt
actcttgggatattggaggaggagtttcatataaaagatgctgtagcccgaattacagtc
gaactagctaagagagaatggccacagctatggccctcccttcaggaagaccttttcaaa
ctctgtcaaatgggggagacacagacagagctggtgctgaaggtctacctccgcctggtg
gaggatgcggtcctcttacagaccattccccaccagaggcgccgcgagatcatgctggga
ctgaccgccaacatgaaggacttgtttgaaatgtttgtccagtttctccgccttcacaca
aaccttgctgatgaaaatttgacctccgacccccagaagagtaaggcccacctacgggtc
agtgaggccgtgttgtacaccttggctggatacctggactgggtcagcatgaacctcatc
ttcactaacaacagtgttctactgcagatgctttgtctgttgctaggcaatagtagtctg
caactcttggcagcagaatgcttgctcaccattgttggaagaaagggaaaggttgaagaa
aggaagccattattagtgctgtttagtgatgaggccatgaaaatcatccttagcacagca
gcggcagcagagaagagctcggcccatgatgagtactactatctgtttctgaagaagctg
tgtttggtccttacagatctcggaaagcaagtctgtgctctctggggtgtggtaccagac
tgtgagcagcccccaaactttgccatgtaccttgaagcactgatggcctttacgcagcac
ccaagtcaaattttgagcagttacacacagtctgtgtggcaggccttcatgagacatgag
tttatcagtaaggaccccattctcctgtcattcataccaaagttatttgaaacatcaacc
aaaatcctgttaaaggtgggttttccatccaaggacaactccccaagctgtgattattcc
agacaggattttgacagtgatgaagatttctctgcatttttctcccgatacagagcggag
gttgccgacatggtccgtcaggccgtcctgttacaaccagagctggccttcaacttcgcc
aaacaatggctggaaaccaccatatgtaaacccattgacactggtacagaggatggtgtg
atgtgtaacttgtcctccccttcctttttggagtgggatgccatgactctatttatagaa
agtgtgatgtcacgcatagcaatgacagattacagtcctgacccaaatatgggagtggct
ctgctcaaaagtgccttagcctaccagtcacaggatccattgattttgtctagtctgttg
tcttgcttgtcagctttggttgtcttcttgagaaattccacagaaaccattccagctgtg
ctggagaaaatattttcgggggtgacttttgctttccctgggcagaataagagtaacagg
agtcggtcagtgaagaacgtccgacagcatgcctgctccatgctggtgacgatatgcaaa
acccagacagatctaatctttcctgtgtttgatgagctctatcaatacataaaaaacatt
tcctctgatgtcgagcagctctcccagatggagaagtgtatattgatagaggcccttata
cttgtatgcaatagatttaacaattacgaaaaacagtcatctttcctggaagaaatttta
cagcctgccaaagaattgtggttgtctgagcaattccgacaagccttcagtggatctgac
aagtggatgtcgtacataggcctagatcaggccccgcgggaaccaagctcagaggacacc
tgtggaattaacaggtctcatatagcttactgtatcaacatgatgatggctgtcttaaag
agaagcaaatggccagaggacccacaggttgcagaaaatggtggctttgtactaatgaag
cgagatgatggatcagtcattcttaagaatcctgcaaccgtccatgtcagcagaatgctg
gaaaatctactcctctttatgaagagcatgaatgggagctggcatccagccatgttacaa
aggagacacccagagctagaaaaatcctttgatctggttgaaaatgaaaaatatgcaatt
ttaggtatccccatgccctgtgtggacaacaccagctcccctgtgtgtaagaacccggtc
acacgtatacagaactttctcaccaccatgcatgactatggctgccatatcctgggcaat
gctggacagtgccttgggtatgagttttacgccattcctaaccttcctcagtccatcctg
tccaccgtgttcaccaatctagactatctacctgactacagaatcaaaccattcataagg
gttatactcaagcctttcattgtgaattgtcccaaagatctctactcagtagctgtgata
ccattgttggaatttgtttgtccctacttctatcagaaattaaattcaaaatggcagctg
attaaccaaagattgagtgaagatggtgtagaggacaacatggaagctcaggaaatcctg
gaagatcagctagtcaggcagttaaccagggaatatattgactttttgggaatcatattt
cacaagttaaaacaagaccctgtccctgatgatgtgaagatggatgatgcggagaacatt
cctgtgacacagaaagaggaagccatgacagatctaggacagctgtgtatgaggtgtgag
agtgtgtatccttctgtaatgatgtgtgtgtttggggctctatcatggagggacaccata
gcctgcaataaatcagtccctctgtgctggtccacagtcagacaattggtaagcactggt
cacatgactctggacatagccagtaacttcctgtgtaatgtgatctatggactacagatg
catggacagcatgaagggccactggctctcttactgggactgatcacccaaatgtatgaa
ctgctgagacctgcatttcctgatctgtccaatgttcttctccaagttccaaactgtacc
acctcagatataaaggatctagatgctaaagttcttcagacagcctcacaaaaacaaatc
atgaatgacaaaaagcgacgagaggcattcaaaaagatcttatctgatgtaatagggaaa
aatctgggacagcagtttaaaaaggagtcccagtacaaagacttacctccgatatttaga
atcagacctccaaaatctaccagtgtcttagagcagagggaaggagctagcgggctatgt
gagctttttaatccgacggatgactga
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integrated database retrieval system