KEGG   Magallana gigas (Pacific oyster): 105347003
Entry
105347003         CDS       T03920                                 
Name
(RefSeq) lissencephaly-1 homolog
  KO
K16794  platelet-activating factor acetylhydrolase IB subunit alpha
Organism
crg  Magallana gigas (Pacific oyster)
Pathway
crg00565  Ether lipid metabolism
crg01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:crg00001]
 09100 Metabolism
  09103 Lipid metabolism
   00565 Ether lipid metabolism
    105347003
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:crg03036]
    105347003
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:crg04147]
    105347003
Chromosome and associated proteins [BR:crg03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    105347003
Exosome [BR:crg04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   105347003
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz WD40_MABP1-WDR62_2nd EIF3I Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR75_1st Beta-prop_EML_2 Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_DCAF4 WDR90_beta-prop_4th Beta-prop_Nup120_160 NBCH_WD40 Beta-prop_EML WD40_RFWD3 Beta-prop_Vps41 Beta-prop_RIG_2nd Beta-prop_SPT8 Beta-prop_IFT140_1st WD_LRWD1 LisH_PAC1 Nucleoporin_N PROPPIN Beta-prop_WDR19_1st LisH Beta-prop_WDR35_TULP_N Beta-prop_NUP159_NUP214 Beta-prop_WDR11_2nd Pox_A_type_inc
Other DBs
NCBI-GeneID: 105347003
NCBI-ProteinID: XP_011454155
UniProt: A0A8W8K853
LinkDB
Position
3:41739643..41747921
AA seq 408 aa
MVLSQRQKDELNRAIADYLSSNGYLSALGEFQKEASLPGDIDKKYGGLLEKKWTSVIRLQ
KKVMDLEAKLSEAEKEYNSGGPSRDRRSPAEWIPRPPERYTLSGHRSPVTRVVFHPTYSI
MVSSSEDATIKLWDYETGDYERTLKGHTDTVQDIAFDHTGKFLASCSADMKIKLWDFTSY
ECVKTLYGHDHNVSSISFVPSGDHLVSSSRDKTIKMWDVSTGFCVKTFTGHREWVRMVRV
YHDGSLLASCSNDQTVRIWVTATTECKMELREHEHVVECIAWAPESAQPTINEAISVDNK
KEKRSGPFLISGSRDKTIKMWDVSVGLCLFTLTGHDNWVRGLVFHPGGKYILSASDDKTL
RVWDIKNKRNHKTLEAHSHFTTSLDMHKNAPFVITGSVDQTIKVWECR
NT seq 1227 nt   +upstreamnt  +downstreamnt
atggttttatcacaaagacaaaaagatgaattaaacagagctattgctgattatcttagc
tcaaatggatacctttcagcactaggtgaatttcaaaaagaagccagtttgccaggagat
atagataagaaatatggcggcttgcttgaaaagaaatggacgtcagttatcagattacag
aaaaaggtcatggacctagaagcaaagctgtctgaagcagagaaagagtacaattcagga
gggccatctcgtgaccgtcgcagtccagcagagtggatcccccgacccccagagaggtac
acgctcagcggtcaccgaagcccagtcacaagggtcgtgtttcaccctacttatagcatc
atggtgtcatccagtgaagatgcaacaattaagctttgggattatgagactggtgactac
gaaagaactttaaaaggccatacagatactgtgcaggacatagcttttgatcacaccgga
aagtttttggcatcctgctctgctgatatgaaaattaaactttgggacttcacatcatat
gagtgtgtcaaaactctgtatggtcatgatcacaatgtgtccagtatttcgtttgtgcca
agtggagatcatcttgtttcctcttccagagacaaaaccatcaaaatgtgggatgtcagc
acaggattttgtgtgaaaaccttcaccggccatagagaatgggtgagaatggtcagagtc
taccatgatggatcactcttggccagctgttcaaatgaccagactgttagaatttgggta
accgccaccacagaatgtaaaatggagttacgagaacatgagcatgttgttgagtgcatc
gcctgggcccctgagtctgctcagccaacaattaatgaagcaatcagtgttgataacaag
aaggagaagagatctggtccatttctgatatctggatcacgtgacaaaacaatcaagatg
tgggacgttagtgtgggactgtgtttgttcactttgacgggacatgacaactgggtgagg
ggactggtgttccacccaggtggcaagtatatcctgagtgcctcggacgacaagaccctg
agagtatgggacatcaaaaacaagaggaaccacaaaaccctggaggcccactcccatttc
acaacctctttagatatgcacaagaatgctccatttgtgataactggctcggtcgaccag
acgatcaaagtatgggagtgtcgttag

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