Magallana gigas (Pacific oyster): 105347003
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Entry
105347003 CDS
T03920
Name
(RefSeq) lissencephaly-1 homolog
KO
K16794
platelet-activating factor acetylhydrolase IB subunit alpha
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg00565
Ether lipid metabolism
crg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09100 Metabolism
09103 Lipid metabolism
00565 Ether lipid metabolism
105347003
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
crg03036
]
105347003
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
crg04147
]
105347003
Chromosome and associated proteins [BR:
crg03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
105347003
Exosome [BR:
crg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
105347003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_EML_2
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_Nup120_160
NBCH_WD40
Beta-prop_EML
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_RIG_2nd
Beta-prop_SPT8
Beta-prop_IFT140_1st
WD_LRWD1
LisH_PAC1
Nucleoporin_N
PROPPIN
Beta-prop_WDR19_1st
LisH
Beta-prop_WDR35_TULP_N
Beta-prop_NUP159_NUP214
Beta-prop_WDR11_2nd
Pox_A_type_inc
Motif
Other DBs
NCBI-GeneID:
105347003
NCBI-ProteinID:
XP_011454155
UniProt:
A0A8W8K853
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All DBs
Position
3:41739643..41747921
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AA seq
408 aa
AA seq
DB search
MVLSQRQKDELNRAIADYLSSNGYLSALGEFQKEASLPGDIDKKYGGLLEKKWTSVIRLQ
KKVMDLEAKLSEAEKEYNSGGPSRDRRSPAEWIPRPPERYTLSGHRSPVTRVVFHPTYSI
MVSSSEDATIKLWDYETGDYERTLKGHTDTVQDIAFDHTGKFLASCSADMKIKLWDFTSY
ECVKTLYGHDHNVSSISFVPSGDHLVSSSRDKTIKMWDVSTGFCVKTFTGHREWVRMVRV
YHDGSLLASCSNDQTVRIWVTATTECKMELREHEHVVECIAWAPESAQPTINEAISVDNK
KEKRSGPFLISGSRDKTIKMWDVSVGLCLFTLTGHDNWVRGLVFHPGGKYILSASDDKTL
RVWDIKNKRNHKTLEAHSHFTTSLDMHKNAPFVITGSVDQTIKVWECR
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggttttatcacaaagacaaaaagatgaattaaacagagctattgctgattatcttagc
tcaaatggatacctttcagcactaggtgaatttcaaaaagaagccagtttgccaggagat
atagataagaaatatggcggcttgcttgaaaagaaatggacgtcagttatcagattacag
aaaaaggtcatggacctagaagcaaagctgtctgaagcagagaaagagtacaattcagga
gggccatctcgtgaccgtcgcagtccagcagagtggatcccccgacccccagagaggtac
acgctcagcggtcaccgaagcccagtcacaagggtcgtgtttcaccctacttatagcatc
atggtgtcatccagtgaagatgcaacaattaagctttgggattatgagactggtgactac
gaaagaactttaaaaggccatacagatactgtgcaggacatagcttttgatcacaccgga
aagtttttggcatcctgctctgctgatatgaaaattaaactttgggacttcacatcatat
gagtgtgtcaaaactctgtatggtcatgatcacaatgtgtccagtatttcgtttgtgcca
agtggagatcatcttgtttcctcttccagagacaaaaccatcaaaatgtgggatgtcagc
acaggattttgtgtgaaaaccttcaccggccatagagaatgggtgagaatggtcagagtc
taccatgatggatcactcttggccagctgttcaaatgaccagactgttagaatttgggta
accgccaccacagaatgtaaaatggagttacgagaacatgagcatgttgttgagtgcatc
gcctgggcccctgagtctgctcagccaacaattaatgaagcaatcagtgttgataacaag
aaggagaagagatctggtccatttctgatatctggatcacgtgacaaaacaatcaagatg
tgggacgttagtgtgggactgtgtttgttcactttgacgggacatgacaactgggtgagg
ggactggtgttccacccaggtggcaagtatatcctgagtgcctcggacgacaagaccctg
agagtatgggacatcaaaaacaagaggaaccacaaaaccctggaggcccactcccatttc
acaacctctttagatatgcacaagaatgctccatttgtgataactggctcggtcgaccag
acgatcaaagtatgggagtgtcgttag
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