Magallana gigas (Pacific oyster): 105347027
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Entry
105347027 CDS
T03920
Name
(RefSeq) transcription elongation factor SPT4
KO
K15171
transcription elongation factor SPT4
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
105347027
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crg03021
]
105347027
03019 Messenger RNA biogenesis [BR:
crg03019
]
105347027
Transcription machinery [BR:
crg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
105347027
RNA polymerase I system
105347027
Messenger RNA biogenesis [BR:
crg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
105347027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt4
SBP
CTD1
Motif
Other DBs
NCBI-GeneID:
105347027
NCBI-ProteinID:
XP_011454200
UniProt:
K1PMW2
LinkDB
All DBs
Position
3:complement(3806310..3809384)
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AA seq
117 aa
AA seq
DB search
MSLETVPKDQRNLRACLLCSLVKTLEQFEYDGCDNCEEYLRLKNNRERVYDCTSSNFDGL
IALMGPEDSWVAKWQRIGRFVKGCYAISVTGRLHPSTVRDLKSKGVYYRSRDTSLKT
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atgtcacttgaaacggttcctaaagaccagagaaatttaagggcttgtcttttatgttct
ttggttaagacactagagcaatttgagtatgatggctgtgataattgtgaggaatatctc
cgattaaagaacaacagggaacgcgtctacgactgcaccagctccaacttcgatggatta
attgctttaatgggtccagaggacagctgggtggccaagtggcagcgaattggtagattt
gttaaggggtgctatgccatatctgtgactggtcgactccaccccagcaccgtcagggac
ctcaaaagtaaaggcgtgtattaccggtcaagagacaccagcctgaagacatga
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