Magallana gigas (Pacific oyster): 105347109
Help
Entry
105347109 CDS
T03920
Name
(RefSeq) protocadherin-11 X-linked isoform X1
KO
K16498
protocadherin delta 1
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
105347109
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
crg01009
]
105347109
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
crg04515
]
105347109
Protein phosphatases and associated proteins [BR:
crg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
105347109
Cell adhesion molecules [BR:
crg04515
]
Cadherins
Protocadherins
105347109
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
PepSY
Motif
Other DBs
NCBI-GeneID:
105347109
NCBI-ProteinID:
XP_011454316
UniProt:
K1QH30
LinkDB
All DBs
Position
2:14137815..14170110
Genome browser
AA seq
1006 aa
AA seq
DB search
MASILPYSLVLVIFGISCCQCQSVAYNTAEEVLPPVYLGNVAKDSNLSSTIDPSILANIK
FSFLSVGSDSDNSDLFQINENTGDLETKSKLDREALCPFQKLCVLPLRIGANSGTFFRTI
NVNISISDRNDNSPLFPMNSTSLSIPEDANINSTFPLSSALDRDMGENNSLKTYVLEPPS
DTFGLLLGRKIDETLEVNLVLTQKLDREKLRSYRVYLVAKDGGLPQRSSTMTINVAVQDI
NDNKPRFSYSQYNVTIQEDITVGTTIMKVSASDDDDGQNGVVEYQFSSTPNGESQKLFSI
NNNTGEVKVIQQLTFTSGEPHRIVVSAIDHGFPALSSQAFINIHVVDVNNHAPEININLL
SGGKVSESSNKGTVIAYVAVVDRDTGKNGQVKCKIIHPKFQLHVLSNTEYKVVVSDELDR
EENIEYIVKVYCEDDGIPKQNKSKSFIVQVLDTNDNEPKFDRDLYNATITENKAPGQMIT
KVTASDSDQEDNAEVHYAIEPNFRSKFEVDSSTGIIRAKVEFDREQESSITFKVYAADNG
TPVPLTATATVKLNIEDDNDEFPTFDKSSYNFQVMENKNADFVVGTVLATDKDIGSNAAI
VYTLPFSYQNAPFSINPSTGEIKTNRRLDREAKPSYTLSVMATDRGVSPKNSSCTVTVTV
LDENDEYPHIRFPNRGNESIKVPHTTLPNSIVTQVEAYDKDEGENGTLRYSIVKRDDDNL
FYIDAKTGQIYLSRKIESFDIKEFSLFIDVSDQGAVPLKTGVEVRLFVEYHAIPTVAEQK
IGQNVLIAITIACVTIVLSLAILVTIFLIKRVDNNKRKRLPNVESIDQHEFQLPDTVQYN
SKKSCLTRENSHKTYLTDNNNLTSHEVKKVSFSSDDQQDSGIFMIGRDVGPNGIVSTNQH
IYANHHQSPYNSQPEDTPPPRPRREKKPSDLHQEELNRMASINFHQKLINNYNKPLVYHP
EENRHFLSLKKPGVEDTNSDGSGEVTVSDSGRGGSMEDLHRASVMI
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atggcctccatcttgccctacagtttggttctggtgattttcgggatctcttgttgtcag
tgccaaagtgttgcctacaacaccgcagaggaagtcctgccaccagtttatctcggtaat
gtggcaaaagacagcaacctctcttccaccattgatccaagcattcttgccaacatcaag
ttcagttttctgagtgtaggtagtgattctgacaacagtgatctcttccaaattaacgaa
aatacaggagatctagagaccaaatcaaaactagacagagaggccctctgtccttttcag
aaactttgtgttcttcctctcaggattggtgctaacagtggaacttttttccggaccatc
aatgttaacatttccatttctgacagaaatgacaactccccattatttcctatgaattct
acctcattgtctattccagaagatgccaacatcaattcaacttttcctctttccagtgca
ttagatagagacatgggagaaaataattcattaaaaacatatgtattagagcctccaagc
gatacatttggattattgctgggccgcaaaattgatgaaactttggaggtgaatttggtg
ctaactcagaaacttgacagagaaaaactgcgttcttatagagtgtacttggtcgctaaa
gatggtggtcttcctcaaaggtcgagtaccatgacaataaatgttgctgttcaggatata
aatgacaacaaacctaggtttagctactcccaatacaatgttactattcaggaggacatt
actgttggaacaaccatcatgaaggtgtctgcttctgatgatgatgatggacaaaatggc
gtcgttgaataccaattttcgtcaactccaaatggagaaagccagaaattattttcaatt
aacaacaatacgggggaggtcaaagtcattcaacaactgacctttacctctggtgagccc
cacagaattgtagtctctgcaattgaccatggatttcctgcccttagtagtcaggctttt
atcaacatacacgttgttgatgtcaacaatcatgctccagaaatcaacatcaaccttctc
tctggtggtaaagtgagtgagagttccaataaaggaactgtcattgcatatgtcgctgtt
gttgatagagacaccggtaaaaacggacaagtcaaatgtaaaatcattcatccaaaattt
cagcttcacgttctctccaacacggagtacaaagttgttgtatctgatgagctggacaga
gaggagaatatagagtacatagtcaaagtctactgtgaggacgatggcattccaaaacag
aacaaatcaaagagtttcatagtgcaagtcctcgacacgaatgacaatgaacccaagttt
gacagagatttgtataacgcgaccattacagagaacaaagctcctggccagatgatcacc
aaagtcacagcttctgacagtgaccaggaagacaatgcagaggtccactacgctatagag
ccaaactttcggagcaagtttgaagtggattctagcactggaataatcagagctaaagtg
gagtttgacagagaacaggagagttccattactttcaaggtgtatgctgccgacaatgga
acaccagttcccctgactgctacagccaccgtgaaacttaatattgaggatgacaatgat
gaatttccaacgtttgataagagtagctacaatttccaagtgatggagaacaagaatgct
gattttgtggtgggaacagtacttgctacagacaaagacattggttccaatgcagccatt
gtgtacactctacccttttcctaccagaatgctcctttctccatcaacccatcaacagga
gagattaaaactaacagacgactggatcgtgaagccaaaccaagctacactctctccgtg
atggccacagatagaggtgtttcaccaaaaaactcatcttgcactgtgactgtaacagtc
ttggatgaaaatgatgagtacccccatatcaggttccccaacagaggaaacgagtcaatc
aaagtaccccacaccaccctaccaaactccattgtcactcaagtagaggcctatgacaaa
gatgaaggagagaatgggactctaagatacagcattgtgaagcgggatgatgacaacctg
ttttatattgacgccaaaactgggcagatttatttatccaggaagatcgaaagtttcgac
atcaaggagttttctctgttcattgacgtttctgaccaaggtgctgttccactgaaaact
ggggtggaagtgagactgtttgtggaatatcatgcgattccaacagtggcggagcagaaa
attggacagaatgtgttaatagccattaccattgcatgtgtgacaatagtgctttcattg
gccattttagtgaccattttcctgatcaagagagtggataataataagcgtaaaagactt
cctaatgtggaatccattgatcagcatgaattccagctcccagacactgtgcaatacaat
tctaaaaaatcttgtctcactcgagaaaactcacataaaacgtatctcacagacaataat
aatctcacatctcatgaagtgaagaaagtgagcttctcgtcagacgatcaacaagattca
gggatttttatgattggtcgggatgtgggacccaatggcattgtctccaccaatcaacac
atctatgcaaatcaccatcagtctccatataatagtcagcctgaagacacccctccccca
cgacctcggagggagaagaagccgtccgatctccaccaggaggaactcaaccgaatggcg
tccatcaacttccaccagaaactcatcaacaactacaacaaacctctagtctatcatccc
gaggagaacagacattttctgtccctgaagaaaccaggtgttgaggacacgaacagtgat
ggatcaggggaggtcactgtgtcagacagcggacgtgggggaagcatggaggatcttcac
agagccagtgtcatgatctag
DBGET
integrated database retrieval system
