Magallana gigas (Pacific oyster): 105347138
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Entry
105347138 CDS
T03920
Name
(RefSeq) vitamin D3 receptor B isoform X8
KO
K08538
farnesoid X receptor beta
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crg03000
]
105347138
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
crg03310
]
105347138
Transcription factors [BR:
crg03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
105347138
Nuclear receptors [BR:
crg03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
105347138
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
105347138
NCBI-ProteinID:
XP_011454352
UniProt:
K1PW47
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Position
2:complement(58206757..58255336)
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AA seq
517 aa
AA seq
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MKYFFEMENSYIMECDQKSPDSSAGASMTFQKKDKTCLVCGDKALGYNFNAVSCESCKAF
FRRNAHKVIRGRCEGRCDITVESRSFCKKCRLAKCFTVGMRKDMILNDEQKQVRKQKIII
NKLRKHGQLPPEDTYAASRQDVNDSLQDSIRSQNLHNLRMSFPNLSDKELDVLMKMKVEQ
YPEGKDSSSELKYPSWSESQGIVADILANLPEIDQCILNELRIAHEQSSFLANTTTSIKA
PPTNATEFVNLAEGFVRRIIKVAKNIEFFKMICKEDQIALLKGSVVEIMMLRSAINYNVE
TESWSFSTMKCLSKPPGPSTSSESGSGQSHPGQLSQTDLTNRPFSKGMEAFSGAGQMGGL
PNEEEMKRLREMMSSRIKAQEGVKSEVGAVSASILKAGGSETYNMFLTYSKFIKSLMRTI
HGDLLALKLLIMLSLFSADRQGVLEHDKIQQIQECYAGILQKYVERRFPEDKIMFAKIVM
KLTDLRNINEVHTKMLLKMKVDSIEPLLIEIFDLPNE
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgaagtactttttcgagatggagaactcttacatcatggaatgtgaccagaagagtcct
gattcctcagcgggggcatccatgaccttccagaagaaggacaagacatgtctggtctgt
ggggacaaggcgctgggctacaacttcaacgctgtctcctgcgagtcctgcaaagcattt
ttccgcaggaatgcacacaaggtgattcgtgggcgatgtgagggcagatgtgacatcaca
gttgaatccaggtccttctgcaagaaatgccgcttggccaagtgctttactgtgggcatg
agaaaagacatgatattaaatgatgagcagaaacaagtaagaaagcagaaaatcattata
aacaaattacgtaaacatgggcagcttccaccggaagacacttacgctgcctcaagacaa
gacgtcaatgattccttgcaggatagcattcgttcacagaatctccataacctgcgaatg
tcctttccaaacttatcagacaaagaacttgatgttcttatgaaaatgaaggtggaacaa
tacccagagggaaaagattcttcgtcagagctcaaatatccaagttggagtgaatcccag
ggaatcgtggcagacatcttggctaacttaccggagattgaccagtgtatactcaatgag
ttgaggattgcacatgaacagagttcctttctggccaacacaacaacttccataaaagct
ccacccacaaatgctacagagtttgtgaacttagctgaaggttttgtgaggagaattatc
aaggtggcaaaaaacattgaattctttaaaatgatctgtaaagaagaccagatagctctc
ttgaagggttctgttgtggagattatgatgttgagatcggcgataaactacaacgttgag
acggagtcatggagcttcagcaccatgaagtgtttgtccaaacctccaggcccctcaaca
agttctgaatcagggtctgggcaatcccatccagggcaattgtcccagacagatctaaca
aatcgacctttttctaaaggaatggaagcatttagtggggctggtcagatggggggactt
cccaatgaagaggaaatgaaaagactgagagaaatgatgagttctcgcatcaaagcacag
gaaggagtgaaaagtgaagtaggggctgtcagcgccagtattctcaaagctggaggctca
gaaacttacaacatgttcttgacttattccaagttcatcaagtctctaatgcggacaatt
catggagatttgttggcactgaagcttctgatcatgttgtctctgttctcggcggacagg
cagggtgttctagaacatgacaagattcagcagatacaagagtgttatgctggaatccta
caaaaatacgtagagagaagatttccggaggataaaatcatgtttgccaaaattgttatg
aaactgactgatcttcgaaatattaacgaagtgcatacaaaaatgttgctcaaaatgaag
gtggacagtatagaacctttgttgatagagatattcgatttgccaaacgagtga
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