Magallana gigas (Pacific oyster): 105347215
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Entry
105347215 CDS
T03920
Name
(RefSeq) vacuolar protein sorting-associated protein 35 isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
105347215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crg04131
]
105347215
Membrane trafficking [BR:
crg04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
105347215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
TRF
FerA
Motif
Other DBs
NCBI-GeneID:
105347215
NCBI-ProteinID:
XP_034336745
UniProt:
A0A8W8JX11
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Position
3:complement(19632915..19641844)
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AA seq
802 aa
AA seq
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MPSTPQLSPQEEQEKLLEEGISIVKNQSFQMKRCLDKGKLMDGLKHASTMLGELRTSLLS
PKSYYELYMAISDELRHLELYLCDEFQKGRKVADLYELVQYAGNIVPRLYLLITVGVVYI
KSNELSRKDILKDLVEMCRGVQHPLRGLFLRNYLLTCTKNVLPDTEEELATNDYEYGTVM
DSIDFILLNFSEMNKLWVRMQHQGHTRDRNKREQERRELRILVGTNLVRLSQLECIDMEK
YKKVVLPAVLEQVVSCRDPIAQEYLMECIIQVFPDDFHLQTLNPFLKACAELHESVNVKN
IIIALVDRLAQFAQNEEGSGIPPEIQLFDIFSDQISQVIQNRPDMPPEDIVALQVALINL
ALKCYPDKVDFVDKVLETTEDIFNRLNLDHSSCSLEYGSPVSKELMRLMKIPVDSYNNIL
TVLELSHFGPIFDYFDYQSRKLMCSYLINNVLENDTRIPTQDQVDNILNIVNVLVQDQSD
QPAEPDDPEDFAEEQVLMGRFIHLLQAEDPNQQYLILNTARKHFGGGGDKRIKFTLPPIV
FAAYRLAMRYKEAKEEDENWEKKCQKIFQFCHQTVGALIKADMAEMPLRLFLQGALTAGE
IEFENHETVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTLEQMSCFGDENHEPLRTQC
ALAASKLLKKPDQCRGVCTCSHLFWSGRSASQEGELQDSKRVSDCLKKGVKIANQCMDSS
VQVQLFVELLNHYIYYYEKGNDQVTIQVLNQLIAKIKETLPNLEANEETEQINKHFQNTV
EHLKLRRDGSETEGPSYEELVL
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgccttccacacctcagttatccccccaggaggagcaggagaagttgttggaggaggga
atcagtatagtcaagaaccagtccttccagatgaagagatgcctggacaaaggaaaacta
atggatggtttaaagcatgcatcaacaatgctaggagaactgagaacatcactcctgtcc
ccaaagagctactatgaattgtatatggctatttctgatgaattgaggcatttggagttg
tacctctgtgatgaatttcaaaaaggaagaaaagttgctgacctttatgaacttgtacag
tatgcaggaaacatagttcccaggctttacctgttaatcactgtgggagtggtctacatc
aaatcaaacgaactctcacggaaagacatcctgaaagacttggtggagatgtgtcgagga
gtgcagcaccccttaaggggcctctttctgaggaattacctcctgacctgtacaaagaat
gttctgccagacactgaggaggagctagccacaaacgactacgagtatggaacagtgatg
gattccattgacttcatcttactgaacttttccgagatgaacaaactctgggtcagaatg
cagcatcaaggtcacactcgagatcgcaataagcgagagcaggagaggcgagaactcagg
atcttggtcggaactaatcttgttcggctgagtcagctggaatgtattgacatggaaaag
tacaaaaaggtggttttgccggctgtgttagaacaagtggtttcgtgtagagaccccata
gcacaggaatacctgatggagtgtatcatccaggttttcccagatgattttcatctacaa
actctgaatcctttcctcaaagcgtgtgccgaacttcatgaaagcgtcaatgtgaagaat
atcattatagctctggtggacagacttgcacagtttgcacagaatgaagaaggatcaggg
attcccccagagatccagctgtttgatattttctcagaccaaatatctcaagtgattcag
aatcgcccagacatgcccccagaggatatagtggccctgcaggtggcgctgataaatctg
gcgttgaaatgttacccagacaaagtagactttgtggacaaagtgttggaaactacagag
gacatcttcaacaggctgaatctggaccactcttcttgcagcctggaatacggcagtccc
gtgtcgaaggagctgatgcggctgatgaagattccggttgactcatacaacaacattctt
actgtgctggaactgtcacactttggtcccatctttgactactttgactaccagagcaga
aaactcatgtgttcctatctcatcaataatgtgttggaaaacgatacccgtataccaact
caagatcaggtggataacattttgaacattgtgaacgtccttgtacaagaccagagtgac
cagccggcggaacccgatgacccggaggacttcgccgaggagcaggtgctcatgggaagg
ttcatccacctactccaagcggaggatccaaatcagcaatatctgatattgaatacagcc
agaaaacattttgggggtggtggagataaaagaattaagttcacgcttccccctattgtg
tttgctgcatacagactagcaatgagatacaaagaagccaaagaagaggatgaaaactgg
gagaagaaatgccagaagatattccagttctgccatcagacggtaggagctttgatcaag
gccgacatggcagagatgccacttcgacttttcctgcagggagcattgacggctggagaa
atcgaatttgaaaaccatgaaactgtagcctacgaattcatgtcacaggcattttcactc
tacgaagatgagatcagtgatagcaaagcccagcttgcagccattacgcttattatcggc
acgcttgaacaaatgagttgctttggagatgagaaccacgaacctcttcgaactcagtgt
gccctggctgcctccaaactcctcaagaaaccagaccaatgtcgaggagtctgcacatgc
tcacatctcttctggtcaggaaggtccgcatcacaggaaggggagctccaggatagtaaa
cgagtgtccgactgcttgaagaagggagtgaagatagctaaccagtgtatggacagttca
gtacaagtgcagttatttgtggaacttctcaatcactatatatactactatgagaaaggc
aacgatcaggttacgattcaagtcctcaaccaactgatagctaaaataaaagagactttg
cctaatttggaagcaaatgaagaaacggaacagatcaacaagcattttcagaataccgtc
gaacatttaaaactacgaagagacggtagtgaaactgagggaccttcatatgaggaactt
gtgctttaa
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