KEGG   Magallana gigas (Pacific oyster): 105347321
Entry
105347321         CDS       T03920                                 
Name
(RefSeq) deubiquitinating protein VCPIP1
  KO
K11861  deubiquitinating protein VCIP135 [EC:3.4.19.12]
Organism
crg  Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:crg00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:crg01002]
    105347321
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:crg04121]
    105347321
Enzymes [BR:crg01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     105347321
Peptidases and inhibitors [BR:crg01002]
 Cysteine peptidases
  Family C64
   105347321
Ubiquitin system [BR:crg04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   OTU
    105347321
SSDB
Motif
Pfam: VCIP135_N OTU OTU1_UBXL DUF5817 DUF2756
Other DBs
NCBI-GeneID: 105347321
NCBI-ProteinID: XP_065941598
LinkDB
Position
5:41843216..41874145
AA seq 1195 aa
MRKSSSGSPDSYKILYGTCPDEQCKAKLYFPSYDKSIECTNCGQRHEKSAIKNVAEVTNP
KVALHNILKNILLGNVKPKKGADNVKVLGLSNYVCKIVSPILTKYGMDKNTGSAKLLSEL
GQPAVLDCGKILGDRAFLIEEENLDIIGYGKDRTGSAHYLSDTLKVIRIANDNETRLVPI
HADGDGHCLVHAVSRALVGRELFWHGLRVNLMHHFQSKLTTYKDLFRDFIDVDEWEAIIN
ECDPDFVPQDGEPLGLRNIHVFGLANVLRRPIILLDSISGIESSGDYSGVFLPGLLPPNE
CKGRDGVLNKPLCIAWSSMGRNHYIPLVGIKGKEQPLLPRDMIQRAWGLPSMQIDKYMDF
NENGSCVIGGNKCLSDKYIRTLVSAMEKVYMDKYGVHPQLVADTHQYLYRTLGMVGARME
EVLKTTREAIQRKTLYRCLTCEAIMEYQLHEEWFQKGGSLYNLAVKTHGKLKSDKKYSFP
QQGAVCSYDKDQDKLVPDPGRCKPSTCTYCQGENVRLVNGDGSVCYENGDRTNTPAVTSR
CMCGFKHFWDGKEYDNLPEIFPISMEWNGEVVTEKVVWFQYESDITLNSNVFEVAHKLVQ
KHFPGEFGSERLVQRVVDTILRHTAPKVKDKEGASTSVVSPYQDTEWSAEEPSKIILTGH
KQKTLHKEELTVSQKEKMVKKQIETQAPKQQQKKSQELAAAGSKSSPSKPKVETVQRKEL
SPVPMETDKSSSHKKIRVATSDGRQVMLSVEGQVNFDTLQNMIYKAVKVPPERQRIRIGF
PPKELKRPSDSDINEPIPLSHGDKISLEIIPLTHSLSESGAESSHKQEHRALKHSSSSPA
KSKQHWSSFEEDIHSNSFEPLLHSFHEHAGNTSNSLDAAVASLTIMATLKGRDLWTHVQT
MPHLFSVGGLFYKQVERDLGLVDGKHCTLPTLPGKVFRYNQPENRLELCMEPYGHFPIEP
DVENRAKETRPIFGSRSEGSFSAFSGAVGQEKSKQAAFTGQGHSLKSMPDIERMPEDIPE
NIHHHARHSHTLCNPYVHQESIAEEPEDQSVAEVEKTKGGGDRKAKHHRMGPGYSVIDHS
NVNRTNQSIQQFKDLAESIERTMHEEISKIDEEMEKLDEEEEEKKSRTSSVGSSHTPGNH
DDAKTTQDTYPSDTTDNMCSVTSEAMEVTGSEEGRKLPTMADDQVTEPGQTMDEQ
NT seq 3588 nt   +upstreamnt  +downstreamnt
atgaggaaatcatcaagtggtagcccagattcctataaaattttatatggaacatgccct
gatgaacaatgcaaagcaaagctttattttccatcttacgacaaaagtatcgagtgcacc
aattgtggacaaagacatgaaaaatcagccataaaaaatgttgcagaggtaaccaatcca
aaagtggcgcttcacaacattctgaaaaacattcttcttggaaatgtgaaacctaaaaaa
ggtgcagacaatgtgaaagtgctgggtctctcaaattatgtgtgtaaaattgtttcacca
attttgacaaaatatggcatggataagaacaccggttctgccaaactgttgtcagagctt
ggccagccagccgtcttggactgcggaaagatcttgggtgatagggctttccttatagag
gaagagaatctggatataattggatatgggaaggaccgaacaggcagtgctcactacctg
tccgacactctcaaagtcattagaatagccaatgataatgaaactagactggtcccaatt
catgctgatggagatggtcattgccttgtgcatgctgtgtcaagagctctggttggacgg
gaactgttttggcatggtctgagagtaaaccttatgcatcattttcagtcaaagctaacg
acatataaagatctttttcgtgattttattgatgtggacgaatgggaggccatcatcaat
gaatgtgatcctgattttgtgccacaagatggagaaccccttggtttacgaaacattcat
gtatttggactggctaatgtactgagaaggccaatcattttattggattctatcagtgga
attgaaagttcaggcgattattcaggtgtgtttctgcctggcctgttgcctccaaatgaa
tgtaaggggagggatggagttctgaacaaaccactgtgtattgcctggagtagcatgggg
agaaaccactacataccactggttggaataaaagggaaggagcagcccctattgccccgt
gacatgatccagagggcatggggcttgccctccatgcagatcgacaagtacatggacttc
aacgagaatggcagctgtgtgatcggaggaaacaagtgtctgtcggataaatacataagg
accctggtatcagcaatggagaaggtttacatggacaagtatggagttcacccccagctt
gtggctgacactcaccagtatctctacagaacactaggtatggtgggagcccgaatggag
gaagttctaaaaaccaccagagaagccattcagaggaagactctgtatcggtgtctgact
tgtgaggcaattatggagtatcagcttcatgaagaatggttccagaaaggaggcagtctc
tataacctggctgtgaagactcatgggaaactaaagtcggacaaaaagtactcctttccc
caacaaggagctgtgtgtagttatgataaggatcaggataaacttgttcccgacccaggc
cgatgtaaacccagcacttgcacgtattgtcagggtgagaacgttcgtctggtgaatggg
gatggcagtgtctgttatgagaacggcgatagaaccaatactccagcagtgaccagtcga
tgcatgtgtggatttaaacatttctgggacggcaaggaatatgacaacctaccagaaatc
tttccaatttctatggaatggaatggagaagtagtgacagaaaaagttgtgtggtttcaa
tacgagtctgatatcacattgaacagcaatgtttttgaagtggctcataagctagtccag
aaacactttccaggagagtttggcagtgagcgactggtacagagagtggtagacaccata
ctgcgtcacacagccccaaaagtcaaggacaaggagggagccagcacctcagttgtgtcc
ccttatcaagacactgaatggtcagcagaggagccctcaaagatcatactgactgggcac
aagcaaaaaacactccataaggaggaactgacagttagtcagaaagagaaaatggtaaag
aagcaaatagagactcaggccccgaaacagcaacagaaaaaatcccaggaattggctgca
gctggaagcaaatcttctccttcaaagcccaaagttgagactgtacagagaaaagaatta
tcaccggttcccatggaaactgataaatcctctagtcacaaaaaaatccgggtagccaca
tctgatggaagacaggttatgttgtctgtagaaggacaggtaaactttgataccctacag
aacatgatatacaaggcagtgaaggttccgccggagagacagagaattcggattgggttc
cctcccaaagagttaaagaggccctctgactcggacattaatgaaccaattccactctct
cacggagacaaaatatcccttgagattattccacttacacattctctctccgagtctgga
gcagagagttcccataaacaggaacacagagctttgaaacattcctcctcttcccccgcc
aaatccaagcagcactggagcagctttgaggaggatatccactccaattcctttgaacct
ctgcttcatagttttcatgagcatgcaggtaatactagtaacagcttagatgctgcagtt
gcctctctcacaataatggctaccttgaaaggtcgtgacctttggacccatgtacagacc
atgcctcatttgttttctgtgggtggattgttttacaaacaagtggagcgtgacttaggc
ctagtcgatggaaaacactgtactctaccaacacttcctggaaaggtattcagatataac
cagccagaaaatagactggaactttgtatggaaccatatggacatttccccattgaacca
gatgtggagaacagagctaaagaaacgagacctatatttggttctcgaagtgaagggtca
ttcagtgcattcagtggtgctgtgggacaggaaaaaagcaagcaggccgcattcacaggt
caaggacattccctaaaatcgatgcctgacatcgaaagaatgccagaggacatcccagaa
aatattcatcaccatgctcggcactcccacactctgtgtaacccctatgtccaccaagag
tccattgctgaggagcccgaggatcagtctgtggctgaggtggagaaaaccaagggggga
ggggacaggaaggcaaaacatcacaggatgggacctggatacagtgtgattgaccactcc
aatgtaaacagaacaaaccagtccattcagcagtttaaggacttggccgagagcattgaa
agaacaatgcatgaggaaatttccaaaattgatgaagagatggaaaagcttgatgaagag
gaagaggagaagaaaagtagaacatctagtgtgggctccagccatacccctggtaaccat
gacgatgctaagactacacaggacacgtacccgagtgatactacagacaatatgtgctct
gtcacttcagaggctatggaggtcacaggaagtgaggaagggagaaaactcccaacaatg
gccgacgatcaagtcacagaaccaggtcaaacaatggatgaacaatag

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