Magallana gigas (Pacific oyster): 105347321
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Entry
105347321 CDS
T03920
Name
(RefSeq) deubiquitinating protein VCPIP1
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
crg01002
]
105347321
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crg04121
]
105347321
Enzymes [BR:
crg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
105347321
Peptidases and inhibitors [BR:
crg01002
]
Cysteine peptidases
Family C64
105347321
Ubiquitin system [BR:
crg04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
105347321
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VCIP135_N
OTU
OTU1_UBXL
DUF5817
DUF2756
Motif
Other DBs
NCBI-GeneID:
105347321
NCBI-ProteinID:
XP_065941598
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All DBs
Position
5:41843216..41874145
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AA seq
1195 aa
AA seq
DB search
MRKSSSGSPDSYKILYGTCPDEQCKAKLYFPSYDKSIECTNCGQRHEKSAIKNVAEVTNP
KVALHNILKNILLGNVKPKKGADNVKVLGLSNYVCKIVSPILTKYGMDKNTGSAKLLSEL
GQPAVLDCGKILGDRAFLIEEENLDIIGYGKDRTGSAHYLSDTLKVIRIANDNETRLVPI
HADGDGHCLVHAVSRALVGRELFWHGLRVNLMHHFQSKLTTYKDLFRDFIDVDEWEAIIN
ECDPDFVPQDGEPLGLRNIHVFGLANVLRRPIILLDSISGIESSGDYSGVFLPGLLPPNE
CKGRDGVLNKPLCIAWSSMGRNHYIPLVGIKGKEQPLLPRDMIQRAWGLPSMQIDKYMDF
NENGSCVIGGNKCLSDKYIRTLVSAMEKVYMDKYGVHPQLVADTHQYLYRTLGMVGARME
EVLKTTREAIQRKTLYRCLTCEAIMEYQLHEEWFQKGGSLYNLAVKTHGKLKSDKKYSFP
QQGAVCSYDKDQDKLVPDPGRCKPSTCTYCQGENVRLVNGDGSVCYENGDRTNTPAVTSR
CMCGFKHFWDGKEYDNLPEIFPISMEWNGEVVTEKVVWFQYESDITLNSNVFEVAHKLVQ
KHFPGEFGSERLVQRVVDTILRHTAPKVKDKEGASTSVVSPYQDTEWSAEEPSKIILTGH
KQKTLHKEELTVSQKEKMVKKQIETQAPKQQQKKSQELAAAGSKSSPSKPKVETVQRKEL
SPVPMETDKSSSHKKIRVATSDGRQVMLSVEGQVNFDTLQNMIYKAVKVPPERQRIRIGF
PPKELKRPSDSDINEPIPLSHGDKISLEIIPLTHSLSESGAESSHKQEHRALKHSSSSPA
KSKQHWSSFEEDIHSNSFEPLLHSFHEHAGNTSNSLDAAVASLTIMATLKGRDLWTHVQT
MPHLFSVGGLFYKQVERDLGLVDGKHCTLPTLPGKVFRYNQPENRLELCMEPYGHFPIEP
DVENRAKETRPIFGSRSEGSFSAFSGAVGQEKSKQAAFTGQGHSLKSMPDIERMPEDIPE
NIHHHARHSHTLCNPYVHQESIAEEPEDQSVAEVEKTKGGGDRKAKHHRMGPGYSVIDHS
NVNRTNQSIQQFKDLAESIERTMHEEISKIDEEMEKLDEEEEEKKSRTSSVGSSHTPGNH
DDAKTTQDTYPSDTTDNMCSVTSEAMEVTGSEEGRKLPTMADDQVTEPGQTMDEQ
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaatcatcaagtggtagcccagattcctataaaattttatatggaacatgccct
gatgaacaatgcaaagcaaagctttattttccatcttacgacaaaagtatcgagtgcacc
aattgtggacaaagacatgaaaaatcagccataaaaaatgttgcagaggtaaccaatcca
aaagtggcgcttcacaacattctgaaaaacattcttcttggaaatgtgaaacctaaaaaa
ggtgcagacaatgtgaaagtgctgggtctctcaaattatgtgtgtaaaattgtttcacca
attttgacaaaatatggcatggataagaacaccggttctgccaaactgttgtcagagctt
ggccagccagccgtcttggactgcggaaagatcttgggtgatagggctttccttatagag
gaagagaatctggatataattggatatgggaaggaccgaacaggcagtgctcactacctg
tccgacactctcaaagtcattagaatagccaatgataatgaaactagactggtcccaatt
catgctgatggagatggtcattgccttgtgcatgctgtgtcaagagctctggttggacgg
gaactgttttggcatggtctgagagtaaaccttatgcatcattttcagtcaaagctaacg
acatataaagatctttttcgtgattttattgatgtggacgaatgggaggccatcatcaat
gaatgtgatcctgattttgtgccacaagatggagaaccccttggtttacgaaacattcat
gtatttggactggctaatgtactgagaaggccaatcattttattggattctatcagtgga
attgaaagttcaggcgattattcaggtgtgtttctgcctggcctgttgcctccaaatgaa
tgtaaggggagggatggagttctgaacaaaccactgtgtattgcctggagtagcatgggg
agaaaccactacataccactggttggaataaaagggaaggagcagcccctattgccccgt
gacatgatccagagggcatggggcttgccctccatgcagatcgacaagtacatggacttc
aacgagaatggcagctgtgtgatcggaggaaacaagtgtctgtcggataaatacataagg
accctggtatcagcaatggagaaggtttacatggacaagtatggagttcacccccagctt
gtggctgacactcaccagtatctctacagaacactaggtatggtgggagcccgaatggag
gaagttctaaaaaccaccagagaagccattcagaggaagactctgtatcggtgtctgact
tgtgaggcaattatggagtatcagcttcatgaagaatggttccagaaaggaggcagtctc
tataacctggctgtgaagactcatgggaaactaaagtcggacaaaaagtactcctttccc
caacaaggagctgtgtgtagttatgataaggatcaggataaacttgttcccgacccaggc
cgatgtaaacccagcacttgcacgtattgtcagggtgagaacgttcgtctggtgaatggg
gatggcagtgtctgttatgagaacggcgatagaaccaatactccagcagtgaccagtcga
tgcatgtgtggatttaaacatttctgggacggcaaggaatatgacaacctaccagaaatc
tttccaatttctatggaatggaatggagaagtagtgacagaaaaagttgtgtggtttcaa
tacgagtctgatatcacattgaacagcaatgtttttgaagtggctcataagctagtccag
aaacactttccaggagagtttggcagtgagcgactggtacagagagtggtagacaccata
ctgcgtcacacagccccaaaagtcaaggacaaggagggagccagcacctcagttgtgtcc
ccttatcaagacactgaatggtcagcagaggagccctcaaagatcatactgactgggcac
aagcaaaaaacactccataaggaggaactgacagttagtcagaaagagaaaatggtaaag
aagcaaatagagactcaggccccgaaacagcaacagaaaaaatcccaggaattggctgca
gctggaagcaaatcttctccttcaaagcccaaagttgagactgtacagagaaaagaatta
tcaccggttcccatggaaactgataaatcctctagtcacaaaaaaatccgggtagccaca
tctgatggaagacaggttatgttgtctgtagaaggacaggtaaactttgataccctacag
aacatgatatacaaggcagtgaaggttccgccggagagacagagaattcggattgggttc
cctcccaaagagttaaagaggccctctgactcggacattaatgaaccaattccactctct
cacggagacaaaatatcccttgagattattccacttacacattctctctccgagtctgga
gcagagagttcccataaacaggaacacagagctttgaaacattcctcctcttcccccgcc
aaatccaagcagcactggagcagctttgaggaggatatccactccaattcctttgaacct
ctgcttcatagttttcatgagcatgcaggtaatactagtaacagcttagatgctgcagtt
gcctctctcacaataatggctaccttgaaaggtcgtgacctttggacccatgtacagacc
atgcctcatttgttttctgtgggtggattgttttacaaacaagtggagcgtgacttaggc
ctagtcgatggaaaacactgtactctaccaacacttcctggaaaggtattcagatataac
cagccagaaaatagactggaactttgtatggaaccatatggacatttccccattgaacca
gatgtggagaacagagctaaagaaacgagacctatatttggttctcgaagtgaagggtca
ttcagtgcattcagtggtgctgtgggacaggaaaaaagcaagcaggccgcattcacaggt
caaggacattccctaaaatcgatgcctgacatcgaaagaatgccagaggacatcccagaa
aatattcatcaccatgctcggcactcccacactctgtgtaacccctatgtccaccaagag
tccattgctgaggagcccgaggatcagtctgtggctgaggtggagaaaaccaagggggga
ggggacaggaaggcaaaacatcacaggatgggacctggatacagtgtgattgaccactcc
aatgtaaacagaacaaaccagtccattcagcagtttaaggacttggccgagagcattgaa
agaacaatgcatgaggaaatttccaaaattgatgaagagatggaaaagcttgatgaagag
gaagaggagaagaaaagtagaacatctagtgtgggctccagccatacccctggtaaccat
gacgatgctaagactacacaggacacgtacccgagtgatactacagacaatatgtgctct
gtcacttcagaggctatggaggtcacaggaagtgaggaagggagaaaactcccaacaatg
gccgacgatcaagtcacagaaccaggtcaaacaatggatgaacaatag
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