Magallana gigas (Pacific oyster): 105347475
Help
Entry
105347475 CDS
T03920
Name
(RefSeq) UV excision repair protein RAD23 homolog B
KO
K10839
UV excision repair protein RAD23
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03420
Nucleotide excision repair
crg04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105347475
09124 Replication and repair
03420 Nucleotide excision repair
105347475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
crg03051
]
105347475
03400 DNA repair and recombination proteins [BR:
crg03400
]
105347475
Proteasome [BR:
crg03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
105347475
DNA repair and recombination proteins [BR:
crg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
105347475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
UBA_3
Crinkler
Rad60-SLD_2
UBA_RAD5A
Thioredoxin_13
DUF2604
DUF1421
CUE
Motif
Other DBs
NCBI-GeneID:
105347475
NCBI-ProteinID:
XP_019930556
UniProt:
A0A8W8L6S3
LinkDB
All DBs
Position
7:complement(38865966..38875892)
Genome browser
AA seq
387 aa
AA seq
DB search
MFVTLKTLQQQTFKIEIDPEDLVKSLKEKIENEKGKEHFPAGGQKLIYAGKILDDEKKIG
EYKIEEKNFVVVMVTKPKPAAAKPAEPSPAPPVATPAPAPAATEAPKPAEEKKEEKMETT
QSETKTEAPPASTTSTSTATTETSGSEASGQVSAESMLVTGQEYENMVMEIMSMGFERDQ
VIRALRASFNNPNRAVEYLFQGIPDTPEPEPPTGAPVAPEQTTQQTSPASNPPATGGGSL
SMPAAGQTGGEDPLSFLRSQPQFQRMRQLIQDNPNFLPELLRQIGQSNPPLLQMISQNQE
RFIQMLNEPAEGGDVSDQAQGGGLPPAGAPPGSGIIQVTPSEKEAIERLKALGFSEGMCI
QAYFACERNEDLAANFLLSQTEDDQQS
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgttcgtcacgctgaaaactttacaacaacagaccttcaaaattgaaattgacccagaa
gacttggtcaaaagtttgaaagaaaaaatagaaaatgaaaagggaaaagaacattttccc
gctggaggacagaagttgatctatgcaggaaagattctcgatgatgaaaagaaaataggc
gaatacaaaattgaagagaaaaactttgtagtagtaatggtgacaaagcccaaaccagca
gcagccaaacctgctgagccgagccccgcccctcctgtagccaccccggccccagcccct
gctgcaacggaggcccctaaaccagccgaggagaagaaggaggagaaaatggaaactaca
caaagtgagacaaaaacggaggctccccctgcctccaccaccagtacctccacagctacc
acagagacctcgggctcagaggcctcgggccaggtgtctgccgagagcatgctggtcacc
ggccaggagtacgagaacatggtgatggagatcatgtccatggggttcgagcgagaccag
gtgattcgagcactgagagccagctttaacaatccaaacagagccgtcgagtatctgttc
cagggaatccctgacacaccagaaccggaaccacctacaggagcccctgtagccccagaa
cagaccactcaacagacctccccagcctccaatccccctgccacagggggtgggtcttta
tcaatgcccgcggcaggacagacaggaggagaggaccctttgtcgtttttaagaagtcag
ccacaatttcagagaatgagacaattgatacaagacaaccccaatttcttaccagaactc
ctccgacagataggccagtccaatcctcctttattacagatgataagtcagaatcaagaa
cgcttcatacagatgttgaacgaacctgcagagggaggggatgtatcggatcaggcccag
ggtggggggttacctcctgctggggcacctccagggagtggtattatacaagttacacct
tcagagaaagaggccatagagaggcttaaagctttaggattttcagagggaatgtgcata
caagcctattttgcctgtgaaaggaatgaagatttagctgcaaattttcttttatctcaa
acagaggatgatcagcaaagttga
DBGET
integrated database retrieval system
