Magallana gigas (Pacific oyster): 105347527
Help
Entry
105347527 CDS
T03920
Name
(RefSeq) sodium- and chloride-dependent glycine transporter 1 isoform X1
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
105347527
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
crg02000
]
105347527
Transporters [BR:
crg02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
105347527
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF
GalA_N
Motif
Other DBs
NCBI-GeneID:
105347527
NCBI-ProteinID:
XP_034318381
LinkDB
All DBs
Position
5:complement(40722761..40740756)
Genome browser
AA seq
723 aa
AA seq
DB search
MSDRKEKRSKSEGGIPPGNLGQFPNENNRSIPDIAANVPLMESARDGQRGTEKYHEKSEM
AAGKGWGVAYYKQDYPERDLDDDVNPNDTLVQDVSSTAVLTPLDDDLVGEVKELEDRGNW
TGRFDFLMSLLGYSVGLGNVWRFPYLAYSNGGGAFVFPFVLMLLLLGLPLMFLELALGQY
AALGPSVVFDRLCPLFHGMGYGMISVSGIVSLYYTVIIAWCILYLFTSFTSELPWEKCHP
EWASEHCYSFKEADLCHQVPGQVYYKQVCYNATVSLERNLSLLAQNVTRHPPAQDFFERG
VLDQSNGIENIGVPQWKIALCLLCAWLMTFGALSRGVKSTGKVVYFTALFPYVVLVILFF
RGVTLPGAADGIIYYLTPRFDKLGEAKVWSDAAAQIFFALSPAWGGLITLSSYNQFHNNC
FKDSLIVGIGNICTSIFAGFVIFSIIGYLAHDLQMPIDKVVDQGAGLAFIVYPDVVTRLP
ISPLWSILFFVMMITLGMGSEFALLETMMTAVQDTFPQLRAKKTYVVAVVCLIGFLGGLS
VTCNGGMYILQLMDNYVSSWSVFLMAGLESVTIGWIYGGDRFISDIEMMIGVRGNAFHNF
FKLFWKFLSPMTLAFVFVFNLIQYKPLEFGDYIYPMWSNGIGWILSLVPIIFISTIAITK
ILKGPKEMSIMERVRFLLKPSQSWGPAHKVPTFDISEPDDGIISNPNFSGTVIPNFDSRD
PKV
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacaggaaagagaaaaggtctaaaagtgaaggtggaatcccaccaggaaatctg
ggtcagtttcccaatgaaaataaccgtagcattccagatatagctgccaatgtacctctt
atggagtccgcgcgggatggccagagaggaacggagaagtaccatgagaagagtgagatg
gctgctggaaagggctggggggtcgcatactacaagcaggattacccagagagggacctc
gacgatgatgtgaacccaaatgacacgctagttcaggatgtgtcaagtacagctgttttg
accccattggatgatgacctggtgggggaggtcaaggagttggaggatcgtggaaactgg
acgggaagatttgatttccttatgtcccttctgggatactccgtcggattgggaaatgtt
tggaggtttccatatcttgcatacagcaatggaggaggtgcttttgtgtttccctttgtg
ctgatgttgctgctgctgggacttccccttatgtttctggagctggccctgggacagtat
gcagcactgggaccatcagtcgtgtttgacaggctctgtccattgtttcatggtatgggc
tatggaatgatcagtgtatcaggaattgtatccctatactacactgtcatcatcgcctgg
tgtatcctttacctcttcacctccttcaccagtgagctgccatgggaaaagtgccacccg
gaatgggctagtgaacattgctattccttcaaggaggcagacctgtgtcatcaggtcccg
gggcaagtgtactacaaacaagtctgttataatgctactgtgtccttggagcgaaatctc
agcctactggcccagaatgtcaccagacatcctcctgctcaggatttctttgagcgcggt
gttctggatcagtctaatggtattgaaaacatcggagttccccaatggaaaatcgcttta
tgtttgttgtgtgcttggttaatgacatttggagctctcagcagaggcgtcaaatctact
ggaaaggtggtctacttcacagccctgttcccctacgtagtgctggttattctttttttc
cgtggagttacccttcctggagcagcagacggcatcatctattaccttacccctcgtttt
gacaagcttggagaagcaaaggtgtggtcagatgctgctgctcagatcttctttgccctc
agtccagcatggggtggtcttattacactgtctagttacaatcagtttcacaacaactgc
ttcaaagactccttgattgtgggtattggaaacatctgcaccagtatatttgctggcttt
gtcatcttctccatcattggttaccttgctcatgaccttcagatgcctattgacaaagtt
gtggatcaaggtgctggtttggccttcattgtgtaccctgatgttgtgaccaggctccct
atctcaccattgtggtctattttgttttttgtgatgatgatcacattaggaatgggaagt
gagtttgctttgctggagacaatgatgactgcagtacaagataccttcccccagctgaga
gctaagaaaacctatgttgtggcagtggtatgccttattggtttccttggaggtctctct
gtaacttgcaatggaggcatgtatattctccagcttatggataattatgtgtccagttgg
tcagttttcttgatggcaggtttggaaagtgtaaccattggatggatatatggtggggat
agattcatcagcgacattgaaatgatgattggagtcagaggaaatgctttccacaatttt
ttcaaattattttggaaattcctttcacccatgactcttgcattcgtattcgttttcaac
ttgattcaatacaagcctctggagtttggagattatatttatccgatgtggtctaatggg
ataggatggattctgtctttagttcccattatctttatctcaactattgccattactaag
attttgaaaggacccaaagagatgtctatcatggagagagtaaggttcctgttgaagcca
tcccagtcctggggccccgcccacaaagttccaacctttgacatcagtgaaccagacgat
ggaatcatttccaaccccaacttcagcggcaccgttataccaaactttgattctagagac
ccaaaagtgtga
DBGET
integrated database retrieval system
