Magallana gigas (Pacific oyster): 105347658
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Entry
105347658 CDS
T03920
Name
(RefSeq) DNA damage-binding protein 2 isoform X1
KO
K10140
DNA damage-binding protein 2
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03420
Nucleotide excision repair
crg04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105347658
09124 Replication and repair
03420 Nucleotide excision repair
105347658
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crg04121
]
105347658
03400 DNA repair and recombination proteins [BR:
crg03400
]
105347658
Ubiquitin system [BR:
crg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
105347658
DNA repair and recombination proteins [BR:
crg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
105347658
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_EIPR1
WDR55
Beta-prop_RIG_2nd
EIF3I
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Aladin
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
WD40_Gbeta
Beta-prop_TEP1_C
RMC1_N
Beta-prop_HPS5
WDR90_beta-prop_4th
NBCH_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR11_2nd
WD_LRWD1
Beta-prop_WDR41
Pirin
Motif
Other DBs
NCBI-GeneID:
105347658
NCBI-ProteinID:
XP_034337603
UniProt:
A0A8W8K5U4
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All DBs
Position
3:complement(26030394..26091784)
Genome browser
AA seq
518 aa
AA seq
DB search
MPRKRKEETQNLGKSGRKTKIPKITVDDSGLKYITYAQKLKRKKDQSEKEKEEEKIPSHD
CCEVDAANTLLGLKPRALPFTINVARPSYTISSNLTLQLHGYTMGIPRKSLYKSATKCVI
DMLSDMQISTMTSPFNRRVTAMDWHPTNPDVVVVGSKGGDVFWWDTSNIEKQKFHQGMGA
GGIINSIKFWPHDNSKVLTAAVDGTITLNDIEGKNTQILADTLNAHDFWYCSVDVHAGRK
FVSAGDNVGKLQFLSYEGKKTFEFRLHKNKITHCEFSPMEEWMLCTASTDQTVQIWDVRM
IKDRNSSMCTLKHEKPVNSAHFSRTNGCRLLTTDQCNQVRVYLAPEWHLEKTILHPHRFF
QHITPIKATWHPLLDLAVIGRYPDPNFAGYHENELRTIDIIDVDSEKVVARLHDPSAPGL
VCVNKFNPAGDTLLSGMGVNLLLWRKKEEAAKIQESFMSKLSGRGLDRSSNQGQSRTGRS
GQSLRANDKLKKQTETSENKQTKTKLKVKTTKENQKKK
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgcctagaaaaaggaaagaagaaacccagaacttggggaaatcagggcgaaaaaccaag
atccctaaaattacagttgatgattctggtctgaagtatataacatacgcacaaaaatta
aaaaggaaaaaagatcagtctgaaaaggaaaaagaagaggaaaaaattccaagtcatgac
tgctgtgaagttgatgcagcaaacacacttctaggactcaaacccagggcattgcctttc
actatcaatgtagccagaccatcatacactataagttcaaacctaacacttcagctacat
ggatatacaatgggaattcctaggaaaagcctatataaaagtgccaccaaatgtgtgata
gacatgttatcagacatgcagatatcaaccatgaccagcccattcaatcgccgagtgaca
gctatggattggcatccgaccaatccagatgtggtggtggtaggatccaaaggtggcgat
gtcttttggtgggatacaagcaacattgagaagcagaagttccatcaagggatgggagca
ggaggaatcataaattccattaaattttggccccatgataatagcaaggttctcactgca
gcagtagatgggacaatcaccttgaatgacattgaaggcaaaaacacacagattttggca
gatacgcttaatgctcatgacttctggtactgcagtgtggatgttcatgcaggtaggaaa
tttgtatcagcaggggacaatgttggaaaactccaatttctctcctatgagggcaaaaag
acctttgaatttcgcttacacaagaataagatcacccactgtgaattttcaccgatggaa
gagtggatgctgtgtacagcttctaccgatcaaactgtgcagatatgggatgtcagaatg
ataaaagataggaacagttccatgtgcaccttaaagcatgagaaacctgtcaactcagct
catttcagtcgcactaacggttgccgcctcttgacaacagatcagtgcaatcaagtacga
gtgtatttagctcctgagtggcatctggaaaaaacaatcttacatcctcatagattcttt
caacacataacacctatcaaagcaacatggcatcccttgttggatttagctgtaattgga
agatatccagaccccaactttgctggttaccatgaaaatgaacttcgaactattgacatc
attgatgttgactcagagaaagtagtagccagacttcatgatccttctgctccaggtctt
gtctgtgttaataaatttaatccagctggagatactttgctttcaggaatgggtgttaat
ttgctattatggaggaaaaaggaggaagctgcaaaaattcaggagtcttttatgtcaaag
ttaagtggaaggggtttggatcggagttcaaatcaaggtcaatcaaggacgggaaggtca
ggtcagtctctgagggcaaatgacaaattgaagaaacagacagaaacctcggagaataag
caaaccaaaaccaaactaaaagtgaaaactacaaaggaaaaccagaaaaagaagtga
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