Crassostrea gigas (Pacific oyster): 105347658
Help
Entry
105347658 CDS
T03920
Name
(RefSeq) DNA damage-binding protein 2-like isoform X1
KO
K10140
DNA damage-binding protein 2
Organism
crg
Crassostrea gigas (Pacific oyster)
Pathway
crg03420
Nucleotide excision repair
crg04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105347658
09124 Replication and repair
03420 Nucleotide excision repair
105347658
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crg04121
]
105347658
03400 DNA repair and recombination proteins [BR:
crg03400
]
105347658
Ubiquitin system [BR:
crg04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
105347658
DNA repair and recombination proteins [BR:
crg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
105347658
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
NBCH_WD40
Pirin
Motif
Other DBs
NCBI-GeneID:
105347658
NCBI-ProteinID:
XP_034337603
LinkDB
All DBs
Position
LG6:complement(27072847..27133383)
Genome browser
AA seq
518 aa
AA seq
DB search
MPRKRKEETQNLGKSGRKTKIPKITVDDSGLKYITYAQKLKRKKDQSEKEKEEEKIPSHD
CCEVDAANTLLGLKPRALPFTINVARPSYTISSNLTLQLHGYTMGIPRKSLYKSATKCVI
DMLSDMQISTMTSPFNRRVTAMDWHPTNPDVVVVGSKGGDVFWWDTSNIEKQKFHQGMGA
GGIINSIKFWPHDNSKVLTAAVDGTITLNDIEGKNTQILADTLNAHDFWYCSVDVHAGRK
FVSAGDNVGKLQFLSYEGKKTFEFRLHKNKITHCEFSPMEEWMLCTASTDQTVQIWDVRM
IKDRNSSMCTLKHEKPVNSAHFSRTNGCRLLTTDQCNQVRVYLAPEWHLEKTILHPHRFF
QHITPIKATWHPLLDLAVIGRYPDPNFAGYHENELRTIDIIDVDSEKVVARLHDPSAPGL
VCVNKFNPAGDTLLSGMGVNLLLWRKKEEAAKIQESFMSKLSGRGLDRSSNQGQSRTGRS
GQSLRANDKLKKQTETSENKQTKTKLKVKTTKENQKKK
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgcctagaaaaaggaaagaagaaacccagaacttggggaaatcagggcgaaaaaccaag
atccctaaaattacagttgatgattctggtctgaagtatataacatacgcacaaaaatta
aaaaggaaaaaagatcagtctgaaaaggaaaaagaagaggaaaaaattccaagtcatgac
tgctgtgaagttgatgcagcaaacacacttctaggactcaaacccagggcattgcctttc
actatcaatgtagccagaccatcatacactataagttcaaacctaacacttcagctacat
ggatatacaatgggaattcctaggaaaagcctatataaaagtgccaccaaatgtgtgata
gacatgttatcagacatgcagatatcaaccatgaccagcccattcaatcgccgagtgaca
gctatggattggcatccgaccaatccagatgtggtggtggtaggatccaaaggtggcgat
gtcttttggtgggatacaagcaacattgagaagcagaagttccatcaagggatgggagca
ggaggaatcataaattccattaaattttggccccatgataatagcaaggttctcactgca
gcagtagatgggacaatcaccttgaatgacattgaaggcaaaaacacacagattttggca
gatacgcttaatgctcatgacttctggtactgcagtgtggatgttcatgcaggtaggaaa
tttgtatcagcaggggacaatgttggaaaactccaatttctctcctatgagggcaaaaag
acctttgaatttcgcttacacaagaataagatcacccactgtgaattttcaccgatggaa
gagtggatgctgtgtacagcttctaccgatcaaactgtgcagatatgggatgtcagaatg
ataaaagataggaacagttccatgtgcaccttaaagcatgagaaacctgtcaactcagct
catttcagtcgcactaacggttgccgcctcttgacaacagatcagtgcaatcaagtacga
gtgtatttagctcctgagtggcatctggaaaaaacaatcttacatcctcatagattcttt
caacacataacacctatcaaagcaacatggcatcccttgttggatttagctgtaattgga
agatatccagaccccaactttgctggttaccatgaaaatgaacttcgaactattgacatc
attgatgttgactcagagaaagtagtagccagacttcatgatccttctgctccaggtctt
gtctgtgttaataaatttaatccagctggagatactttgctttcaggaatgggtgttaat
ttgctattatggaggaaaaaggaggaagctgcaaaaattcaggagtcttttatgtcaaag
ttaagtggaaggggtttggatcggagttcaaatcaaggtcaatcaaggacgggaaggtca
ggtcagtctctgagggcaaatgacaaattgaagaaacagacagaaacctcggagaataag
caaaccaaaaccaaactaaaagtgaaaactacaaaggaaaaccagaaaaagaagtga
DBGET
integrated database retrieval system
