Magallana gigas (Pacific oyster): 105347710
Help
Entry
105347710 CDS
T03920
Name
(RefSeq) RING finger protein 37
KO
K10600
U-box domain-containing protein 5 [EC:
2.3.2.27
]
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105347710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crg04121
]
105347710
Enzymes [BR:
crg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105347710
Ubiquitin system [BR:
crg04121
]
Ubiquitin ligases (E3)
U-box type E3
105347710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5918
U-box
zf-RING_UBOX
zf-C3HC4
RING_XB3-XBAT31
zf-RING_2
zf-RING_5
zf-C3HC4_2
Xpo1
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
105347710
NCBI-ProteinID:
XP_011455184
LinkDB
All DBs
Position
8:37242299..37245749
Genome browser
AA seq
558 aa
AA seq
DB search
MLLNFCDSRLYPKIVCDKVSVDGHEVENLISGNFSKRQKGFLGESFIKPPVLVTLSFPCN
IEIKRIIINPCVGAQKSSGIEIYSRSNQVRSGPLWKDVSVNPPKEKNDYEFIVSAVFSPI
GKVQLSNPGSVCFENQLFQSQTGKELQPVSETSYENCVYLKGRNSRNLNYVSDLNIRIMK
TASGRSVAIKSIEVWGQPSRSVPQSVRQKLGQLFTSIPNQVTYVEKFQPQEVEKFQPQEE
NSPKKSCIPTGSQTVHLENGVEVPDDFIDVVTCEIMTVPMLLPCGKNVDQLTLERHNSVE
ASWGRIPSDPFTGVPYDDKNKPLPNVPLKVRIDKFVLENSVKLQHIPKTLGSSAGSCSKY
ERQRKNTSRLIECEKPSENVNNCEQHNESDKTTTTQGRKRRKMFTGSENTTYVRCGELDG
KDSSTRSDVIVSDNSKRADIDPPRSKEKKIKLDFQSSSVKSKTHEEKLKESIDSAFSDIL
SQLPSFTKSNSNASSSSPVIQTHVKCCSCWEQMESLYRAPCGHLFCRACVLKDSKQGLGV
FDKECKKTWKSNQISKVH
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgcttctcaatttttgtgacagccggttatatccgaaaatagtttgtgataaagtgtcc
gtagatggacatgaagtggagaatctaatctccggaaacttctcaaagcgacagaaggga
tttcttggagaatccttcattaaaccacccgtgttggttaccctttcatttccatgcaac
attgagataaaacgaatcattattaacccgtgtgttggggctcaaaagtcatcaggaatt
gagatatacagtcggagcaatcaagtgagatctggtccattgtggaaggacgtttctgta
aaccccccaaaagagaaaaatgattatgaatttattgttagtgccgtgttttcaccaatt
gggaaagttcaactttcaaacccaggctcagtatgttttgagaaccaactctttcagtct
cagacaggaaaagaattgcagccagtttcagagacctcgtatgaaaactgtgtgtattta
aaaggaagaaattcaagaaacttgaattatgtgagtgaccttaacataaggattatgaaa
actgcctcaggcaggtcggttgccattaagagtattgaagtttgggggcagccctcacgc
tcagtgccacagtcagtgagacaaaaattaggccagttgtttaccagcatcccgaatcag
gtcacctatgtggaaaaatttcaaccacaagaagtggaaaaatttcaaccacaagaagaa
aattcaccaaaaaaatcttgtattcctacaggtagtcagactgtgcatttagaaaatggg
gtggaggttccggatgattttattgatgttgtcacttgtgaaataatgactgttcctatg
ttattaccttgtggtaaaaatgtggatcagttaacattggagcgacataattcagtggag
gcttcatggggacgaatacccagtgacccttttacaggagttccctatgatgacaagaac
aagccactgccaaatgtccctctgaaagttcgtattgacaaatttgtacttgaaaacagt
gtgaaattacagcatattccaaaaactcttggcagtagtgctggaagttgttcaaagtat
gaaagacagaggaaaaatactagtagactcatagaatgtgaaaaaccctcagaaaatgta
aacaattgtgaacaacataatgaatccgataaaacaacaacaactcagggcagaaaaagg
agaaaaatgtttactgggtctgagaatactacatatgtgagatgtggagagcttgatggt
aaggattctagcacaagatctgatgttattgtaagtgataattccaaaagagctgatata
gatcctccaaggagtaaagaaaaaaaaataaaacttgattttcagtcttcatctgtgaaa
tcaaagactcatgaggagaaattaaaggagagtattgattctgcctttagtgatatctta
agtcagttaccgtccttcacaaaaagtaattccaatgctagttcctcgtcacctgtcatt
caaactcatgtcaaatgttgcagctgttgggaacaaatggaatctttatatagggcaccg
tgtggacacctattttgtagggcatgtgtactaaaagacagcaagcagggtttgggggtg
tttgataaagaatgcaagaagacttggaagtcaaatcagatatccaaagttcactga
DBGET
integrated database retrieval system
