Magallana gigas (Pacific oyster): 105347771
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Entry
105347771 CDS
T03920
Name
(RefSeq) RAD50-interacting protein 1
KO
K20474
RAD50-interacting protein 1
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crg04131
]
105347771
Membrane trafficking [BR:
crg04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
NRZ (DSL1) complex
105347771
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RINT1_TIP1
HSM3_C
zf-C4H2
Motif
Other DBs
NCBI-GeneID:
105347771
NCBI-ProteinID:
XP_034311255
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All DBs
Position
7:complement(49644714..49657685)
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AA seq
750 aa
AA seq
DB search
MDAPMSVDRCKENAVKIVNSKFGDNIKSLSDLKSFYLETKQTAETIENRLSLSEWDIPPE
VDEALKNAEEAQTSINNLQKKSDAIRNEAVDHCKILKPIVNDLTPLVSQIEELQKYRQYL
SCVAHIENISNQIHTALMSNRTSNAVEEFSSLSEYYIQKQHSKCQNLLQFLKETILFWYN
ILKDKLSSLLEESLKVVGWPLIATATKTPQTSSHPSQKMDAIFLQLLLLQLPDSLSVEVQ
KKTMTFLSREFTFNPLLLPIQHLVTPLRKRFKFHFYGNKQTNNKEKPEWYFGQVLNWIRD
HSSFLDNRIQNLLEIAGFYSVDAKVEFMRGLVVLVMEKMAADLPAVMEDEHLFCHLVDEA
IFFDHELHQIYDYPAGLNSSMDILTVPIVFERWIEIEKKFAIEKMDALLSSPTAWESQYK
NIADIDTLKVPECGESFITLMSTITDRYKYLPSPEHRLKFLDMQLELLEDFRIRLVQVMK
EVTHDSLGDTFCAILNGVHYITDVLREWCNTTFFVELQYHNATRPVEPSTGADEEDTKRP
TKRAGAGFMADESVFDEGIDLFDKLKVEMEKNILKHATLDVQARSQPYRKYRWRNLEDSG
DLSLSTPACDMLMVLRDHLMTMNRKLSKPLFVKMWRKLAEEMSKFMLEEVVLQNRFSEGG
AKQLEFDMTRNLFPLFGEYTTKPQNYFRLINEACTLLCLRVGSALLLREVLMSEESRLEK
EQALQDLGVYKLTPQRALNVLNSRTNLSVT
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgcccatgtcagttgacagatgtaaagaaaacgctgtgaaaattgtaaatagc
aagtttggagataatataaagtcattatcggacttaaaatctttctatttagaaactaaa
caaacagcagaaaccatagaaaatcgtctgtcactttctgaatgggatattcctcctgag
gtggatgaggccttaaaaaatgcagaggaggcacagacctctataaataacctgcaaaaa
aaaagtgatgctattcgaaatgaagctgtggaccactgcaaaatactgaaacccatcgtg
aacgatttgactccacttgttagtcagatagaggaactccaaaagtatagacagtattta
tcatgtgtggctcatatagaaaacataagtaaccagattcataccgcactgatgtccaac
agaacttctaatgcagtggaggaattctcttcactgtcggaatactacatacaaaaacaa
cactcaaaatgccagaaccttttgcagttcctaaaggaaaccatcttattctggtacaac
atactcaaggataaactctcaagtttattagaagagagtttaaaggtggttgggtggcca
ctaattgctacagccacaaagactccccaaacttcatcacatccctcacagaagatggac
gccatctttttacagcttcttctactacagttaccagattctctcagtgttgaggtgcag
aagaaaacaatgacctttctatctcgagaatttaccttcaacccgttattactgcccatt
caacatctagtcaccccactacgcaaacgattcaagttccatttttatggtaacaagcag
acaaataacaaagagaagcctgaatggtactttgggcaagtgttaaactggataagggac
cattcatcgttcctggataacagaatacaaaatttgttggaaattgcaggattttattca
gtggatgcaaaggtggagtttatgagggggctggtggtgcttgtgatggagaagatggcc
gccgaccttcccgcggtgatggaggacgagcacctgttctgtcacctggtggacgaagcc
atcttctttgatcacgaacttcatcaaatctacgactacccagccggactcaacagcagc
atggatatcctgacggtacctatagtgttcgagcgatggattgaaatagaaaagaagttt
gccatagagaagatggatgccctgttatcctcccccacggcctgggagtcccagtataag
aacattgcagatattgacacactgaaagtcccggagtgtggagagagctttatcaccctc
atgtccaccattacagaccgttacaagtacctcccttccccagagcacaggttgaaattc
ctcgacatgcagcttgaattgttggaagacttcagaattcgtcttgtacaagttatgaaa
gaggttacccatgattctctgggcgacactttctgtgcaatattaaatggagtgcattac
attactgatgtcctcagagaatggtgcaacaccactttttttgtggagcttcaataccac
aatgccacgcgaccagtggaaccttccacaggagctgatgaagaggatacgaagaggccg
accaagagagctggagctggttttatggctgatgagagtgtgtttgatgagggcattgat
ctgtttgacaaattgaaagtagaaatggagaaaaacatcctcaaacatgcgaccttagat
gttcaggcccgatcccagccctacagaaagtatagatggaggaatttggaggactctggg
gacctctccctgtctacacctgcctgtgacatgttgatggttctgagagaccacctcatg
accatgaataggaaactcagcaaaccactgtttgtaaaaatgtggaggaagttggcggag
gaaatgagcaagtttatgttagaagaggtggtgcttcagaacaggttcagtgaaggtggt
gccaaacagctggagtttgatatgaccaggaacctcttccctctctttggagaatacacc
acaaagccacagaattacttcagattaatcaatgaagcatgcacactgctgtgcttgagg
gtggggtcagccctgctgctgagggaggtgttgatgtcagaggagagtagactggagaaa
gagcaggccctccaggacctgggggtgtacaaactgaccccccaacgggcgctcaacgtc
ctcaactcacggaccaacctgtcagtgacctga
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