Magallana gigas (Pacific oyster): 105347887
Help
Entry
105347887 CDS
T03920
Name
(RefSeq) uncharacterized protein isoform X1
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg00300
Lysine biosynthesis
crg00470
D-Amino acid metabolism
crg01100
Metabolic pathways
crg01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
105347887
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
105347887
Enzymes [BR:
crg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
105347887
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-GeneID:
105347887
NCBI-ProteinID:
XP_065942775
LinkDB
All DBs
Position
6:5791824..5795245
Genome browser
AA seq
562 aa
AA seq
DB search
MVVVTYTRTECGVDFKNHDITLAVHNMEDIIHGHPKNFQINLGFRYEEDYLYCEDMRVCD
LLNLKDVSSPVYVYSKKQIEANINKYKTAMKNSGRNIQLSYSVKANMNPSILELMRNHGL
FLTLVSGHELRLALDLGQEPGKIVFNGNGKMNWEVDLACRSGVLLNVDSIFNMRQTIDVC
KAGGYVANVLFRINPDINPNVHGYVSTGQEGSKFGISADELEEVLEMATTFEKIRVVGLH
CHIGSTIREPEKFKSVFFSYTSVVLNSFDLAPCVITLNFRQSTRVLVDLFNKLRSRFPDL
YVLNLGGGLSIPYKSQISLPQKCKQVVQCEIDKNDDQEIARLYDNLLTSKLTLSTFLEAI
KPLPRGKEIFLKLQEQVPSEQCLVPEPNDLLSSISDIIPPEAKVILEPGRSLVGNSAILL
SRVLGTKLSKKKNFIVIDGAMTEVIRPCLYGAYHHVELAEPSRAANLQTASDQSKLVWDV
VGPVCESADFIGKDRLLLTPHEGCSIAVFDTGAYCSSMGSNYNMRVRPAELLIDGEKVKV
IRRSETFEDMMKLYTNYYCFSQ
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggttgtagtgacctatactaggacagagtgtggcgttgactttaagaatcacgacata
acattggctgtccacaacatggaagacataatacacggacacccaaagaactttcagatt
aatctgggcttccggtatgaagaagattacctatattgtgaagacatgcgtgtttgtgat
ttattgaatttaaaggatgtgtcgtctccagtttatgtgtacagcaagaaacaaattgag
gcaaatatcaacaaatacaagacagccatgaagaattcaggacgtaacattcagcttagt
tactccgtgaaggccaacatgaatccctctattctggagttgatgaggaaccacggcttg
tttctgaccttggtcagtggccatgaacttcgtctagctcttgaccttggacaagaacct
gggaagattgtctttaatgggaacggcaagatgaattgggaggtagatcttgcctgtaga
tcgggcgtccttctgaacgtggacagtatcttcaatatgagacagaccatagatgtctgc
aaagcggggggatatgtggcaaatgtgttgttcagaataaatccggacataaacccgaat
gttcacggatatgtatcgactggtcaagagggatcaaaatttggaatctctgctgatgag
cttgaggaggttctggaaatggcgacaacgttcgagaaaatccgagtagtcggcctgcat
tgtcatattggttccactataagagagccggagaaattcaagtcagtttttttttcctat
acaagtgttgttttaaattcgtttgatttagccccctgtgtaataacattaaatttcaga
cagagtacacgtgtacttgtggacctttttaataagctaagaagccgcttccctgatttg
tacgtcttgaatcttggcggaggattatcaattccatacaaatctcagatatcactacca
caaaaatgcaaacaggtggttcagtgcgaaatcgacaagaacgatgatcaagagatagca
agattatatgacaatcttctcacatcaaagttaactctttccaccttccttgaagcaatt
aaacctcttcctcgaggaaaagagatatttcttaaactacaggagcaggttccttctgag
cagtgtcttgttcccgaaccaaacgatttgcttagctctatcagcgatatcataccaccg
gaagctaaagtcattctggaacctggacgttcattggtcggaaattctgctattctgttg
tcacgtgttctaggaacaaaattatccaaaaagaaaaatttcattgtaatagatggtgca
atgacagaggtaattcggccgtgtctatatggtgcctatcaccatgtcgagttagcagaa
cctagcagagccgctaatctccaaaccgccagcgaccaatcaaaattggtttgggacgtt
gttggtcctgtatgcgaaagtgctgattttattggaaaggatcggctattattgacacca
catgaaggttgcagcattgcagtgtttgacactggcgcttattgcagcagcatggggtca
aactacaacatgagggtacgacccgcggagttgcttattgatggtgagaaggtgaaggtc
atacgtaggagcgagactttcgaggacatgatgaaattatacacgaactactactgtttt
tcgcaataa
DBGET
integrated database retrieval system
